RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
VPS33A-201ENST00000267199 ZCCHC17Q9NP64 241 aaKnown RBP12.98□□□□□ -0.33
VPS33A-201ENST00000267199 IGKV5-2P06315 115 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 AKNAD1Q5T1N1 836 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 PDE6AP16499 860 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 KIAA0753Q2KHM9 967 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 GOLGA5Q8TBA6 731 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 MKRN1Q9UHC7 482 aaKnown RBP12.97□□□□□ -0.33
VPS33A-201ENST00000267199 RCOR1Q9UKL0 485 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 PTPRMP28827 1452 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 ERVV-2B6SEH9 535 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 CMA1P23946 247 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 C8orf74Q6P047 294 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 TMTC1Q8IUR5 882 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 ARFGAP2Q8N6H7 521 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 JAKMIP2Q96AA8 810 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
VPS33A-201ENST00000267199 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.33
VPS33A-201ENST00000267199 PIK3AP1Q6ZUJ8 805 aa12.96□□□□□ -0.33
VPS33A-201ENST00000267199 ERBB3P21860 1342 aa12.96□□□□□ -0.33
VPS33A-201ENST00000267199 HGSO14964 777 aaPredicted RBP12.96□□□□□ -0.33
VPS33A-201ENST00000267199 TTC19Q6DKK2 380 aaPredicted RBP12.96□□□□□ -0.33
VPS33A-201ENST00000267199 RGS22Q8NE09 1264 aa12.96□□□□□ -0.33
VPS33A-201ENST00000267199 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.33
VPS33A-201ENST00000267199 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
VPS33A-201ENST00000267199 BTBD18B2RXH4 712 aa12.96□□□□□ -0.33
VPS33A-201ENST00000267199 RESTQ13127 1097 aa12.96□□□□□ -0.33
VPS33A-201ENST00000267199 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
VPS33A-201ENST00000267199 EPC1Q9H2F5 836 aa12.96□□□□□ -0.33
VPS33A-201ENST00000267199 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.96□□□□□ -0.33
VPS33A-201ENST00000267199 ATP10DQ9P241 1426 aa12.96□□□□□ -0.34
VPS33A-201ENST00000267199 ATP1A3P13637 1013 aa12.96□□□□□ -0.34
VPS33A-201ENST00000267199 SLFNL1Q499Z3 407 aa12.96□□□□□ -0.34
VPS33A-201ENST00000267199 PI16Q6UXB8 463 aa12.96□□□□□ -0.34
VPS33A-201ENST00000267199 BLZF1Q9H2G9 400 aa12.96□□□□□ -0.34
VPS33A-201ENST00000267199 RTEL1Q9NZ71 1219 aa12.96□□□□□ -0.34
VPS33A-201ENST00000267199 GIGYF2Q6Y7W6 1299 aaKnown RBP12.95□□□□□ -0.34
VPS33A-201ENST00000267199 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
VPS33A-201ENST00000267199 BCAS4Q8TDM0 211 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 UBLCP1Q8WVY7 318 aaPredicted RBP12.95□□□□□ -0.34
VPS33A-201ENST00000267199 RBM28Q9NW13 759 aaKnown RBP12.95□□□□□ -0.34
VPS33A-201ENST00000267199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.34
VPS33A-201ENST00000267199 PCDHA5Q9Y5H7 936 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 RFC4P35249 363 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 ATP1A2P50993 1020 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 E2F4Q16254 413 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 B4GALNT4Q76KP1 1039 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 CARMIL3Q8ND23 1372 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 COBLO75128 1261 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 ZMYND10O75800 440 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 GSTO1P78417 241 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
VPS33A-201ENST00000267199 TTC38Q5R3I4 469 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 WWC2Q6AWC2 1192 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 RABGGTAQ92696 567 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 EEF2KMTQ96G04 330 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 PARD6BQ9BYG5 372 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 KCNF1Q9H3M0 494 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 GPHNQ9NQX3 736 aaPredicted RBP12.95□□□□□ -0.34
VPS33A-201ENST00000267199 CAPN7Q9Y6W3 813 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 CDC25BP30305 580 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 MAP2K2P36507 400 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 GNGT1P63211 74 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 NOSTRINQ8IVI9 506 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 FAM204AQ9H8W3 233 aa12.95□□□□□ -0.34
VPS33A-201ENST00000267199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■■ 149.1
VPS33A-201ENST00000267199 A0A1W2PQ27 194 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 A0A1W2PQ64 194 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 A0A1W2PQD8 194 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 CCT5P48643 541 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 CTSWP56202 376 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 IFNL3Q8IZI9 196 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 ZNF654Q8IZM8 581 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 CRB1P82279 1406 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
VPS33A-201ENST00000267199 KRT13P13646 458 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
VPS33A-201ENST00000267199 NOC4LQ9BVI4 516 aaKnown RBP12.94□□□□□ -0.34
VPS33A-201ENST00000267199 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 F8W031 263 aaPredicted RBP12.94□□□□□ -0.34
VPS33A-201ENST00000267199 M0R2C6 588 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 ACTN2P35609 894 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 PHKA1P46020 1223 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 RBM6P78332 1123 aaKnown RBP12.94□□□□□ -0.34
VPS33A-201ENST00000267199 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 CCDC155Q8N6L0 562 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 SELENOOQ9BVL4 669 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 GREM2Q9H772 168 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
VPS33A-201ENST00000267199 TUBB2AQ13885 445 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 PARP10Q53GL7 1025 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 ANKS4BQ8N8V4 417 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 TUBB2BQ9BVA1 445 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 WWC3Q9ULE0 1092 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms