RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 GNAT2P19087 354 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 TRIM29Q14134 588 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 INTS5Q6P9B9 1019 aaKnown RBP14.31□□□□□ -0.12
BEST3-201ENST00000266661 TMEM139Q8IV31 216 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 CRACR2BQ8N4Y2 399 aaPredicted RBP14.31□□□□□ -0.12
BEST3-201ENST00000266661 ZNF579Q8NAF0 562 aaKnown RBP14.31□□□□□ -0.12
BEST3-201ENST00000266661 WASF1Q92558 559 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 CHD4Q14839 1912 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 FOXN1O15353 648 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 SLU7O95391 586 aaKnown RBP14.31□□□□□ -0.12
BEST3-201ENST00000266661 CRKLP46109 303 aaKnown RBP14.31□□□□□ -0.12
BEST3-201ENST00000266661 GRIN1Q05586 938 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 TBX2Q13207 712 aaPredicted RBP14.31□□□□□ -0.12
BEST3-201ENST00000266661 AKT1S1Q96B36 256 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 SHISA4Q96DD7 197 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 PRDM10Q9NQV6 1147 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 SEC31BQ9NQW1 1179 aa14.31□□□□□ -0.12
BEST3-201ENST00000266661 CBFA2T2O43439 604 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 ZNF18P17022 549 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 UBASH3AP57075 661 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 SEC23AQ15436 765 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 SLC15A2Q16348 729 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 KMT5BQ4FZB7 885 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 TRIM65Q6PJ69 517 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 DIS3L2Q8IYB7 885 aaKnown RBP14.3□□□□□ -0.12
BEST3-201ENST00000266661 ZNF397Q8NF99 534 aaPredicted RBP14.3□□□□□ -0.12
BEST3-201ENST00000266661 SPATA20Q8TB22 786 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 MED15Q96RN5 788 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 FANCLQ9NW38 375 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
BEST3-201ENST00000266661 GNPATO15228 680 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 BCAMP50895 628 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 RTN1Q16799 776 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 REXO1L1PQ8IX06 675 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 CNNM3Q8NE01 707 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 PKNOX2Q96KN3 472 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 GTPBP4Q9BZE4 634 aaKnown RBP14.29□□□□□ -0.12
BEST3-201ENST00000266661 TFCP2L1Q9NZI6 479 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 MAN1B1Q9UKM7 699 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 KCNJ14Q9UNX9 436 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 TMEM232C9JQI7 657 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 FANCGO15287 622 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 DEXIO95424 95 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 GNL2Q13823 731 aaKnown RBP14.29□□□□□ -0.12
BEST3-201ENST00000266661 MORC3Q14149 939 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 RILPL1Q5EBL4 403 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 FCHSD1Q86WN1 690 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 TMTC2Q8N394 836 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
BEST3-201ENST00000266661 SLC4A4Q9Y6R1 1079 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 COL4A1P02462 1669 aa14.29□□□□□ -0.12
BEST3-201ENST00000266661 ZNF804BA4D1E1 1349 aa14.28□□□□□ -0.12
BEST3-201ENST00000266661 CICQ96RK0 1608 aaPredicted RBP14.28□□□□□ -0.12
BEST3-201ENST00000266661 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
BEST3-201ENST00000266661 ETF1P62495 437 aaKnown RBP14.28□□□□□ -0.12
BEST3-201ENST00000266661 FUT2Q10981 343 aa14.28□□□□□ -0.12
BEST3-201ENST00000266661 WTAPQ15007 396 aa14.28□□□□□ -0.12
BEST3-201ENST00000266661 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
BEST3-201ENST00000266661 UTP14AQ9BVJ6 771 aaKnown RBP14.28□□□□□ -0.12
BEST3-201ENST00000266661 LAMB2P55268 1798 aa14.28□□□□□ -0.12
BEST3-201ENST00000266661 ACTN4O43707 911 aaKnown RBP14.27□□□□□ -0.12
BEST3-201ENST00000266661 NTSR2O95665 410 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 FMR1Q06787 632 aaKnown RBP eCLIP14.27□□□□□ -0.12
BEST3-201ENST00000266661 POSTNQ15063 836 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 OLFM4Q6UX06 510 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 SYT10Q6XYQ8 523 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 ZNF654Q8IZM8 581 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 ENOX1Q8TC92 643 aaKnown RBP14.27□□□□□ -0.12
BEST3-201ENST00000266661 OXER1Q8TDS5 423 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 NACAP1Q9BZK3 213 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 STK32BQ9NY57 414 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 PCDHB6Q9Y5E3 794 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 PHLPP2Q6ZVD8 1323 aa14.27□□□□□ -0.12
BEST3-201ENST00000266661 UTRNP46939 3433 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 H2AFXP16104 143 aaPredicted RBP14.27□□□□□ -0.13
BEST3-201ENST00000266661 PPARAQ07869 468 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 NR5A1Q13285 461 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 SAFBQ15424 915 aaKnown RBP eCLIP14.27□□□□□ -0.13
BEST3-201ENST00000266661 ELF2Q15723 593 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 PKN1Q16512 942 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 PARP10Q53GL7 1025 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 SPECC1Q5M775 1068 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 FBXO38Q6PIJ6 1188 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 ADGRA1Q86SQ6 560 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 COL23A1Q86Y22 540 aaPredicted RBP14.27□□□□□ -0.13
BEST3-201ENST00000266661 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 TRIML1Q8N9V2 468 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 MLKLQ8NB16 471 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 LRRN4CLQ8ND94 238 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 MPHOSPH8Q99549 860 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 ZKSCAN3Q9BRR0 538 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 NOL10Q9BSC4 688 aaKnown RBP14.27□□□□□ -0.13
BEST3-201ENST00000266661 CCDC87Q9NVE4 849 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 SERTAD1Q9UHV2 236 aa14.27□□□□□ -0.13
BEST3-201ENST00000266661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.26□□□□□ -0.13
BEST3-201ENST00000266661 CCDC196A0A1B0GTZ2 297 aa14.26□□□□□ -0.13
BEST3-201ENST00000266661 SERPINC1P01008 464 aa14.26□□□□□ -0.13
BEST3-201ENST00000266661 FGRP09769 529 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms