RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 SEC23AQ15436 765 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 IFIT1BQ5T764 474 aaKnown RBP11.83□□□□□ -0.52
LSG1-201ENST00000265245 METTL16Q86W50 562 aaKnown RBP11.83□□□□□ -0.52
LSG1-201ENST00000265245 ZSCAN10Q96SZ4 725 aaPredicted RBP11.83□□□□□ -0.52
LSG1-201ENST00000265245 SEMA3EO15041 775 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 CBFA2T2O43439 604 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 NR5A1Q13285 461 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 ELOA2Q8IYF1 753 aaPredicted RBP11.83□□□□□ -0.52
LSG1-201ENST00000265245 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 ZNF592Q92610 1267 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 FAM84BQ96KN1 310 aaPredicted RBP11.83□□□□□ -0.52
LSG1-201ENST00000265245 NOL10Q9BSC4 688 aaKnown RBP11.83□□□□□ -0.52
LSG1-201ENST00000265245 CTIFO43310 598 aaKnown RBP11.82□□□□□ -0.52
LSG1-201ENST00000265245 SERPINC1P01008 464 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 ATP2B1P20020 1258 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 ZNF710Q8N1W2 664 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 ENAHQ8N8S7 591 aaPredicted RBP11.82□□□□□ -0.52
LSG1-201ENST00000265245 CCDC34Q96HJ3 373 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 NYXQ9GZU5 481 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 PCDHA5Q9Y5H7 936 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 RGL2O15211 777 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 MYO1BO43795 1136 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 SPECC1Q5M775 1068 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
LSG1-201ENST00000265245 FBXO2Q9UK22 296 aaPredicted RBP11.82□□□□□ -0.52
LSG1-201ENST00000265245 CALM1P0DP23 149 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 CALM2P0DP24 149 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 CALM3P0DP25 149 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 DYNLL1P63167 89 aaKnown RBP11.82□□□□□ -0.52
LSG1-201ENST00000265245 CCAR2Q8N163 923 aaKnown RBP11.82□□□□□ -0.52
LSG1-201ENST00000265245 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
LSG1-201ENST00000265245 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 CABP5Q9NP86 173 aa11.82□□□□□ -0.52
LSG1-201ENST00000265245 RBM28Q9NW13 759 aaKnown RBP11.82□□□□□ -0.52
LSG1-201ENST00000265245 TRMT1Q9NXH9 659 aaKnown RBP11.82□□□□□ -0.52
LSG1-201ENST00000265245 RREB1Q92766 1687 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 USP27XA6NNY8 438 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 KIF2AO00139 706 aaPredicted RBP11.81□□□□□ -0.52
LSG1-201ENST00000265245 ATP1A3P13637 1013 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 UBASH3AP57075 661 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 RPS8P62241 208 aaKnown RBP11.81□□□□□ -0.52
LSG1-201ENST00000265245 SLC10A5Q5PT55 438 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 PCDHB6Q9Y5E3 794 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
LSG1-201ENST00000265245 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 WTIPA6NIX2 430 aaPredicted RBP11.81□□□□□ -0.52
LSG1-201ENST00000265245 POLR2DO15514 142 aaKnown RBP11.81□□□□□ -0.52
LSG1-201ENST00000265245 PRDM1O75626 825 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 POSTNQ15063 836 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 CFAP100Q494V2 611 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 KANK3Q6NY19 840 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 SETDB2Q96T68 719 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 DACH1Q9UI36 760 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 SRPRBQ9Y5M8 271 aaKnown RBP11.81□□□□□ -0.52
LSG1-201ENST00000265245 SBF2Q86WG5 1849 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 COL1A1P02452 1464 aaPredicted RBP11.81□□□□□ -0.52
LSG1-201ENST00000265245 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
LSG1-201ENST00000265245 TRIM75PA6NK02 468 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
LSG1-201ENST00000265245 NYAP1Q6ZVC0 841 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 FBXO33Q7Z6M2 555 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 NBPF5PQ86XG9 351 aaPredicted RBP11.8□□□□□ -0.52
LSG1-201ENST00000265245 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 KCND1Q9NSA2 647 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 BRWD3Q6RI45 1802 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 CYP2D7A0A087X1C5 515 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 USP17L12C9JPN9 530 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 USP17L21D6R901 530 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 KRT2P35908 639 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 TBC1D9BQ66K14 1250 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 CRNKL1Q9BZJ0 848 aaKnown RBP11.8□□□□□ -0.52
LSG1-201ENST00000265245 ANKRD2Q9GZV1 360 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 VPS54Q9P1Q0 977 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 KCNG1Q9UIX4 513 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 TULP1O00294 542 aaPredicted RBP11.8□□□□□ -0.52
LSG1-201ENST00000265245 PRPF3O43395 683 aaKnown RBP11.8□□□□□ -0.52
LSG1-201ENST00000265245 HIBADHP31937 336 aaKnown RBP11.8□□□□□ -0.52
LSG1-201ENST00000265245 ARMCX5Q6P1M9 558 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 FOXP4Q8IVH2 680 aaPredicted RBP11.8□□□□□ -0.52
LSG1-201ENST00000265245 SMARCE1Q969G3 411 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 LAMB2P55268 1798 aa11.8□□□□□ -0.52
LSG1-201ENST00000265245 SMIM22K7EJ46 135 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 DDAH1O94760 285 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 BMP15O95972 392 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 KCNQ4P56696 695 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 CTR9Q6PD62 1173 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 PDCL2Q8N4E4 241 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 NSUN4Q96CB9 384 aaKnown RBP11.79□□□□□ -0.52
LSG1-201ENST00000265245 V9GY48 417 aaPredicted RBP11.79□□□□□ -0.52
LSG1-201ENST00000265245 ZPR1O75312 459 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 GRIN1Q05586 938 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 PDILTQ8N807 584 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 MLKLQ8NB16 471 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 CTCFLQ8NI51 663 aaPredicted RBP11.79□□□□□ -0.52
LSG1-201ENST00000265245 KIF18AQ8NI77 898 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 CCDC94Q9BW85 323 aaPredicted RBP11.79□□□□□ -0.52
LSG1-201ENST00000265245 HSD3B7Q9H2F3 369 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 PDS5AQ29RF7 1337 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms