RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 SPP2Q13103 211 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 CRHR2Q13324 411 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 CCDC129Q6ZRS4 1044 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 PRRT2Q7Z6L0 340 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-201ENST00000265038 SLC44A5Q8NCS7 719 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 FAM227BQ96M60 508 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 GINM1Q9NU53 330 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 ZBTB21Q9ULJ3 1066 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 FOXP2O15409 715 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 GH2P01242 217 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 ASNSP08243 561 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 SDSP20132 328 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 CERKLQ49MI3 558 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-201ENST00000265038 SBK1Q52WX2 424 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
ERCC8-201ENST00000265038 GIMAP6Q6P9H5 292 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 ANKRD23Q86SG2 305 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 TICAM2Q86XR7 235 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 ZNF280CQ8ND82 737 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 ZNF296Q8WUU4 475 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-201ENST00000265038 HELLSQ9NRZ9 838 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 A0A0D9SFI3 127 aa10.1□□□□□ -0.79
ERCC8-201ENST00000265038 GSPT1P15170 499 aaKnown RBP10.1□□□□□ -0.79
ERCC8-201ENST00000265038 GUCY1A2P33402 732 aa10.1□□□□□ -0.79
ERCC8-201ENST00000265038 TAF1CQ15572 869 aaPredicted RBP10.1□□□□□ -0.79
ERCC8-201ENST00000265038 IFNL3Q8IZI9 196 aa10.1□□□□□ -0.79
ERCC8-201ENST00000265038 DDRGK1Q96HY6 314 aa10.1□□□□□ -0.79
ERCC8-201ENST00000265038 WDR18Q9BV38 432 aa10.1□□□□□ -0.79
ERCC8-201ENST00000265038 TBC1D2Q9BYX2 928 aa10.1□□□□□ -0.79
ERCC8-201ENST00000265038 ZCCHC17Q9NP64 241 aaKnown RBP10.1□□□□□ -0.79
ERCC8-201ENST00000265038 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
ERCC8-201ENST00000265038 PDHXO00330 501 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 APPP05067 770 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 CDK8P49336 464 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 NMIQ13287 307 aaPredicted RBP10.09□□□□□ -0.79
ERCC8-201ENST00000265038 DGKZQ13574 1117 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 ABCB5Q2M3G0 1257 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 TTC22Q5TAA0 569 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 VPS53Q5VIR6 699 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 C16orf86Q6ZW13 317 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 FASTKD5Q7L8L6 764 aaKnown RBP10.09□□□□□ -0.79
ERCC8-201ENST00000265038 AS3MTQ9HBK9 375 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 ZFYVE28Q9HCC9 887 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 SWAP70Q9UH65 585 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 SIPA1L1O43166 1804 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 MCMDC2Q4G0Z9 681 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 SH3D19Q5HYK7 790 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 GADL1Q6ZQY3 521 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 CENPQQ7L2Z9 268 aaPredicted RBP10.09□□□□□ -0.79
ERCC8-201ENST00000265038 AMOTL1Q8IY63 956 aa10.09□□□□□ -0.79
ERCC8-201ENST00000265038 RNF216Q9NWF9 866 aaPredicted RBP10.09□□□□□ -0.79
ERCC8-201ENST00000265038 MINDY4BA8MYZ0 360 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 FKTNO75072 461 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 TDO2P48775 406 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 HMGCS2P54868 508 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 BACE1P56817 501 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 MTMR2Q13614 643 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 SEPT2Q15019 361 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 RAB3GAP1Q15042 981 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 TREML2Q5T2D2 321 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 ZNF589Q86UQ0 364 aaPredicted RBP10.08□□□□□ -0.8
ERCC8-201ENST00000265038 TNS4Q8IZW8 715 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 CABP5Q9NP86 173 aa10.08□□□□□ -0.8
ERCC8-201ENST00000265038 USP17L10C9JJH3 530 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 TLR2O60603 784 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 AKR1B1P15121 316 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 SKAP1Q86WV1 359 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 STK11IPQ8N1F8 1099 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 ACER1Q8TDN7 264 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 NACAP1Q9BZK3 213 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 AGTPBP1Q9UPW5 1226 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 SLC45A1Q9Y2W3 748 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 DDX60LQ5H9U9 1706 aaKnown RBP10.07□□□□□ -0.8
ERCC8-201ENST00000265038 C19orf81C9J6K1 198 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 MPHOSPH10O00566 681 aaKnown RBP10.07□□□□□ -0.8
ERCC8-201ENST00000265038 CENPBP07199 599 aaPredicted RBP10.07□□□□□ -0.8
ERCC8-201ENST00000265038 CYP2C8P10632 490 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 CAP1Q01518 475 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 SIAH1Q8IUQ4 282 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 PROCA1Q8NCQ7 364 aaPredicted RBP10.07□□□□□ -0.8
ERCC8-201ENST00000265038 CCDC17Q96LX7 622 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 NAPBQ9H115 298 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 EMILIN3Q9NT22 766 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 AK9Q5TCS8 1911 aa10.07□□□□□ -0.8
ERCC8-201ENST00000265038 FOCADQ5VW36 1801 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 ADGRA2Q96PE1 1338 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 RASA1P20936 1047 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 SP3Q02447 781 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 ALX1Q15699 326 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 CWC27Q6UX04 472 aaKnown RBP10.06□□□□□ -0.8
ERCC8-201ENST00000265038 C17orf99Q6UX52 265 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 TMEM179Q6ZVK1 233 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.06□□□□□ -0.8
ERCC8-201ENST00000265038 CPA4Q9UI42 421 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 ROBO3Q96MS0 1386 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 CCDC171Q6TFL3 1326 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 CDK5RAP2Q96SN8 1893 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 A0A1W2PRG0 241 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 HIP1O00291 1037 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms