RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ARPP21Q9UBL0 812 aaPredicted RBP8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 ZBTB21Q9ULJ3 1066 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 FOXN1O15353 648 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 CTNND1O60716 968 aaKnown RBP8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 ZBTB48P10074 688 aaPredicted RBP8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 HSPD1P10809 573 aaKnown RBP8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 AKR1B1P15121 316 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 CHMLP26374 656 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 GABPAQ06546 454 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 CERKLQ49MI3 558 aaPredicted RBP8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 BRI3BPQ8WY22 251 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 CHMP4CQ96CF2 233 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 PATL2C9JE40 543 aaKnown RBP8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 TBC1D12O60347 775 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 GNAT2P19087 354 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 MAP2K2P36507 400 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 CDK8P49336 464 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 MAP3K10Q02779 954 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 SPP2Q13103 211 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 SEPT2Q15019 361 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 FOXP4Q8IVH2 680 aaPredicted RBP8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 PTPN18Q99952 460 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 NACAP1Q9BZK3 213 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 EHD4Q9H223 541 aa8.65□□□□□ -1.02
DEPDC1B-201ENST00000265036 HMGCS2P54868 508 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 ATP2B2Q01814 1243 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 PPARAQ07869 468 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 PPIL2Q13356 520 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 MTMR2Q13614 643 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 ABCB5Q2M3G0 1257 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 NOL9Q5SY16 702 aaKnown RBP8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 FAM43AQ8N2R8 423 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 MS4A4AQ96JQ5 239 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 R3HDMLQ9H3Y0 253 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 TOMM22Q9NS69 142 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 WBP1LQ9NX94 342 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 LAMA4Q16363 1823 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 TBC1D8O95759 1140 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 FGAP02671 866 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 ASNSP08243 561 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 MAP2K1Q02750 393 aaPredicted RBP8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 PPATQ06203 517 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 BMP2KLQ5H9B9 411 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 RRP12Q5JTH9 1297 aaKnown RBP8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 TATDN1Q6P1N9 297 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 GADL1Q6ZQY3 521 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 METTL16Q86W50 562 aaKnown RBP8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 TACC3Q9Y6A5 838 aa8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 MKI67P46013 3256 aaKnown RBP8.64□□□□□ -1.03
DEPDC1B-201ENST00000265036 RAD21O60216 631 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 PTH1RQ03431 593 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 SREBF2Q12772 1141 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 FAM47AQ5JRC9 791 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 ERICH6BQ5W0A0 696 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 C16orf86Q6ZW13 317 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 ACER1Q8TDN7 264 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 FEZ1Q99689 392 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 MKNK2Q9HBH9 465 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 RNF186Q9NXI6 227 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 MYH4Q9Y623 1939 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 ZSWIM8A7E2V4 1837 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 MANSC4A6NHS7 340 aaPredicted RBP8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 BTBD19C9JJ37 291 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 HIP1O00291 1037 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 RASA1P20936 1047 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 GUCY1A2P33402 732 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 LBX1P52954 281 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 SNAPC2Q13487 334 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 TREML2Q5T2D2 321 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 IFNL1Q8IU54 200 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 TBC1D10CQ8IV04 446 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 AFG3L2Q9Y4W6 797 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 ROBO3Q96MS0 1386 aa8.63□□□□□ -1.03
DEPDC1B-201ENST00000265036 CYP2C8P10632 490 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 GTF2A2P52657 109 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 SBK1Q52WX2 424 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 GIMAP6Q6P9H5 292 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 SAMD1Q6SPF0 538 aaPredicted RBP8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 ZNF280CQ8ND82 737 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 CABP5Q9NP86 173 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 TAF6LQ9Y6J9 622 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 SGSM2O43147 1006 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 NMT2O60551 498 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 ICA1Q05084 483 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 CRHR2Q13324 411 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 TAF1CQ15572 869 aaPredicted RBP8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 SPICE1Q8N0Z3 855 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 SWAP70Q9UH65 585 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 KCNH4Q9UQ05 1017 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 LOC285556D6RIA3 1793 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 NEDD4P46934 1319 aa8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 GREB1LQ9C091 1923 aaPredicted RBP8.62□□□□□ -1.03
DEPDC1B-201ENST00000265036 A0A1W2PRG0 241 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 UNCXA6NJT0 531 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms