RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 RDH13Q8NBN7 331 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 EPSTI1Q96J88 318 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 CLIC6Q96NY7 704 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 PPP2R2CQ9Y2T4 447 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 ARHGAP44Q17R89 818 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 XAGE2Q96GT9 111 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 USP19O94966 1318 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 CD2BP2O95400 341 aaKnown RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 TUBBP07437 444 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 PFKFB1P16118 471 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 GNAT2P19087 354 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 SUCLG2Q96I99 432 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 NSFL1CQ9UNZ2 370 aaKnown RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 ACTN4O43707 911 aaKnown RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 TRIM14Q14142 442 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 HHATQ5VTY9 493 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 CNNM4Q6P4Q7 775 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 TMTC1Q8IUR5 882 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 GPR161Q8N6U8 529 aaKnown RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 CEP120Q8N960 986 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 IFIH1Q9BYX4 1025 aaKnown RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 DPH5Q9H2P9 285 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 ZNF500O60304 480 aaPredicted RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 RBM28Q9NW13 759 aaKnown RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 ANGEL1Q9UNK9 670 aaKnown RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 A0A1W2PP64 1363 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 MAP3K5Q99683 1374 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 ENC1O14682 589 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 TBC1D8O95759 1140 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 KRT15P19012 456 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 ABCB4P21439 1286 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 CTNNA1P35221 906 aaKnown RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 GCKP35557 465 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 SLC9C1Q4G0N8 1177 aa13.42□□□□□ -0.26
SMG6-201ENST00000263073 SDCCAG8Q86SQ7 713 aaPredicted RBP13.42□□□□□ -0.26
SMG6-201ENST00000263073 CCDC24Q8N4L8 307 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 MLKLQ8NB16 471 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 NGLY1Q96IV0 654 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 TPCN1Q9ULQ1 816 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 ATP5DP30049 168 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 ARHGAP25P42331 645 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 CCT5P48643 541 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 ST5P78524 1137 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 KLHL30Q0D2K2 578 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 ZYXQ15942 572 aaKnown RBP13.41□□□□□ -0.26
SMG6-201ENST00000263073 VPS52Q8N1B4 723 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 TMEM87AQ8NBN3 555 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 CCDC110Q8TBZ0 833 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 ODF2LQ9ULJ1 636 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 SAR1BQ9Y6B6 198 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 BACH1O14867 736 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 VPS41P49754 854 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 PLCD1P51178 756 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 PAK2Q13177 524 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 CLUL1Q15846 466 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 ATL3Q6DD88 541 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 LRRC43Q8N309 656 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 USP28Q96RU2 1077 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMG6-201ENST00000263073 ZWINTO95229 277 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 AATFQ9NY61 560 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMG6-201ENST00000263073 TPX2Q9ULW0 747 aaKnown RBP13.41□□□□□ -0.26
SMG6-201ENST00000263073 CFAP221Q4G0U5 840 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 BCAS4Q8TDM0 211 aa13.41□□□□□ -0.26
SMG6-201ENST00000263073 ITGA6P23229 1130 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 RFC1P35251 1148 aaPredicted RBP13.4□□□□□ -0.26
SMG6-201ENST00000263073 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 PEX26Q7Z412 305 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 KIFC2Q96AC6 838 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 FANCLQ9NW38 375 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 RPL13P26373 211 aaKnown RBP13.4□□□□□ -0.26
SMG6-201ENST00000263073 ADCY1Q08828 1119 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 RPS6KA1Q15418 735 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 FAM47AQ5JRC9 791 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 ZNF804AQ7Z570 1209 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 ZMYM4Q5VZL5 1548 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 E7EWF7 191 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 KCNK3O14649 394 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
SMG6-201ENST00000263073 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
SMG6-201ENST00000263073 PPFIA1Q13136 1202 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 UBL4BQ8N7F7 174 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 VPS37BQ9H9H4 285 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
SMG6-201ENST00000263073 CLTAP09496 248 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 HERC4Q5GLZ8 1057 aaPredicted RBP13.39□□□□□ -0.27
SMG6-201ENST00000263073 CCDC62Q6P9F0 684 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 SNX29Q8TEQ0 813 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 LRRC45Q96CN5 670 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 CAPS2Q9BXY5 557 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 FAM204AQ9H8W3 233 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 PFDN4Q9NQP4 134 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMG6-201ENST00000263073 KIAA0556O60303 1618 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 TSNAXIP1Q2TAA8 658 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 USH1GQ495M9 461 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 DENND2CQ68D51 928 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 ANKRD13CQ8N6S4 541 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms