RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TNNI2P48788 182 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 IQUBQ8NA54 791 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 ZNF622Q969S3 477 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPN3-201ENST00000262539 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
PTPN3-201ENST00000262539 MAP7D2Q96T17 732 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 TOP1P11387 765 aaKnown RBP9.38□□□□□ -0.91
PTPN3-201ENST00000262539 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
PTPN3-201ENST00000262539 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 SLC26A6Q9BXS9 759 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 KDM3BQ7LBC6 1761 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 PKD1L3Q7Z443 1732 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 PLCD1P51178 756 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 DNM1Q05193 864 aaKnown RBP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 STYK1Q6J9G0 422 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 HHIPL2Q6UWX4 724 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 ATP6V0A2Q9Y487 856 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 ECM2O94769 699 aaPredicted RBP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 ARL6IP4Q66PJ3 421 aaKnown RBP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 MLKLQ8NB16 471 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 MNS1Q8NEH6 495 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 TRIM5Q9C035 493 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 ARMT1Q9H993 441 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 LTBP4Q8N2S1 1624 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 FOSP01100 380 aaPredicted RBP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 NEDD1Q8NHV4 660 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 SEC31BQ9NQW1 1179 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 SYCE3A1L190 88 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 BCAMP50895 628 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 CEBPZQ03701 1054 aaKnown RBP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 NOSTRINQ8IVI9 506 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 EDC3Q96F86 508 aaKnown RBP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 FDX1P10109 184 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 XRCC6P12956 609 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 GCFC2P16383 781 aaKnown RBP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 SYKP43405 635 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 NLRP5P59047 1200 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 MFSD14BQ5SR56 506 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 PRR5LQ6MZQ0 368 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 CCDC112Q8NEF3 446 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 CTAGE1Q96RT6 745 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 DACT1Q9NYF0 836 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 COL22A1Q8NFW1 1626 aaPredicted RBP9.37□□□□□ -0.91
PTPN3-201ENST00000262539 LTN1O94822 1766 aa9.37□□□□□ -0.91
PTPN3-201ENST00000262539 B4E1Z4 1266 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 FMNL1O95466 1100 aaPredicted RBP9.36□□□□□ -0.91
PTPN3-201ENST00000262539 LIG1P18858 919 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 CRY2Q49AN0 593 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 ASPRV1Q53RT3 343 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 USP17L12C9JPN9 530 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 USP17L21D6R901 530 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 APBA3O96018 575 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 ACBD3Q9H3P7 528 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 RABGAP1Q9Y3P9 1069 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 ESYT2A0FGR8 921 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 CD2BP2O95400 341 aaKnown RBP9.36□□□□□ -0.91
PTPN3-201ENST00000262539 KRT2P35908 639 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 CCT2P78371 535 aaKnown RBP9.36□□□□□ -0.91
PTPN3-201ENST00000262539 TTC16Q8NEE8 873 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 ERMNQ8TAM6 284 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 FMNL3Q8IVF7 1028 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 JDP2Q8WYK2 163 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 RRP36Q96EU6 259 aaKnown RBP9.36□□□□□ -0.91
PTPN3-201ENST00000262539 PUS7LQ9H0K6 701 aaKnown RBP9.36□□□□□ -0.91
PTPN3-201ENST00000262539 DEF6Q9H4E7 631 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 RESTQ13127 1097 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 LINC00116Q8NCU8 138 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 ANKS1AQ92625 1134 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 CD209Q9NNX6 404 aa9.36□□□□□ -0.91
PTPN3-201ENST00000262539 GSG1L2A8MUP6 293 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 CLCN1P35523 988 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 UBA7P41226 1012 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 KIF23Q02241 960 aaPredicted RBP9.35□□□□□ -0.91
PTPN3-201ENST00000262539 TEX35Q5T0J7 233 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 CCDC150Q8NCX0 1101 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 LUC7LQ9NQ29 371 aaKnown RBP9.35□□□□□ -0.91
PTPN3-201ENST00000262539 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.35□□□□□ -0.91
PTPN3-201ENST00000262539 WWC3Q9ULE0 1092 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 ERLIN2O94905 339 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 GYG1P46976 350 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 AK8Q96MA6 479 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 KCNG1Q9UIX4 513 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 HSPA1LP34931 641 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 TUBB4BP68371 445 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 ENOX2Q16206 610 aaKnown RBP9.35□□□□□ -0.91
PTPN3-201ENST00000262539 CCDC96Q2M329 555 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 CELF1Q92879 486 aaKnown RBP9.35□□□□□ -0.91
PTPN3-201ENST00000262539 MRFAP1L1Q96HT8 127 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 PPEF1O14829 653 aaPredicted RBP9.35□□□□□ -0.91
PTPN3-201ENST00000262539 ENTPD3O75355 529 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 FAM114A1Q8IWE2 563 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 NSUN4Q96CB9 384 aaKnown RBP9.35□□□□□ -0.91
PTPN3-201ENST00000262539 TCEANC2Q96MN5 208 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 PSMD1Q99460 953 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 CNPY2Q9Y2B0 182 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 MROH7-TTC4A0A0A0MT08 1334 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 CCDC93Q567U6 631 aa9.35□□□□□ -0.91
PTPN3-201ENST00000262539 SEC62Q99442 399 aaKnown RBP9.35□□□□□ -0.91
PTPN3-201ENST00000262539 KCNQ2O43526 872 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms