RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 PRDM1O75626 825 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 RHOXF2BP0C7M4 288 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 TXLNAP40222 546 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 CCT6AP40227 531 aaKnown RBP20.47■□□□□ 0.87
TRAF4-201ENST00000262395 UBE3CQ15386 1083 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 RHOXF2Q9BQY4 288 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 TCRBV5S4A2TA0A5A2 114 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 ANKRD18BA2A2Z9 1011 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 IFNAR1P17181 557 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 RAD51AP2Q09MP3 1159 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 MFSD6Q6ZSS7 791 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 ACRBPQ8NEB7 543 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 CDC5LQ99459 802 aaKnown RBP20.47■□□□□ 0.87
TRAF4-201ENST00000262395 ASAP1Q9ULH1 1129 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 ADGRG1Q9Y653 693 aa20.47■□□□□ 0.87
TRAF4-201ENST00000262395 CDC25AP30304 524 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 CASP14P31944 242 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 TDO2P48775 406 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 PLCD1P51178 756 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 TTF1Q15361 905 aaPredicted RBP20.46■□□□□ 0.87
TRAF4-201ENST00000262395 EARS2Q5JPH6 523 aaKnown RBP20.46■□□□□ 0.87
TRAF4-201ENST00000262395 DACH1Q9UI36 760 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 PCDH11XQ9BZA7 1347 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 PCDH11YQ9BZA8 1340 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 KIF4BQ2VIQ3 1234 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 PNKPQ96T60 521 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 STRN4Q9NRL3 753 aa20.46■□□□□ 0.87
TRAF4-201ENST00000262395 MYO1BO43795 1136 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 WTAPQ15007 396 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 NOM1Q5C9Z4 860 aaKnown RBP20.45■□□□□ 0.86
TRAF4-201ENST00000262395 PDE11AQ9HCR9 933 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 VPS54Q9P1Q0 977 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 ECM29Q5VYK3 1845 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 A0A1B0GTH6 734 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 PATL2C9JE40 543 aaKnown RBP20.45■□□□□ 0.86
TRAF4-201ENST00000262395 WNT7AO00755 349 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 N4BP1O75113 896 aaKnown RBP20.45■□□□□ 0.86
TRAF4-201ENST00000262395 PDE8BO95263 885 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 RILPL1Q5EBL4 403 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 AKNAD1Q5T1N1 836 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 ADAM21Q9UKJ8 722 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 LAMB4A4D0S4 1761 aa20.45■□□□□ 0.86
TRAF4-201ENST00000262395 AKAP11Q9UKA4 1901 aa20.44■□□□□ 0.86
TRAF4-201ENST00000262395 LIFRP42702 1097 aa20.44■□□□□ 0.86
TRAF4-201ENST00000262395 ANKZF1Q9H8Y5 726 aa20.44■□□□□ 0.86
TRAF4-201ENST00000262395 PRDM11Q9NQV5 511 aa20.44■□□□□ 0.86
TRAF4-201ENST00000262395 TRMT112Q9UI30 125 aaKnown RBP20.44■□□□□ 0.86
TRAF4-201ENST00000262395 IQSEC3Q9UPP2 1182 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-201ENST00000262395 MYH7P12883 1935 aa20.44■□□□□ 0.86
TRAF4-201ENST00000262395 ERVV-2B6SEH9 535 aa20.44■□□□□ 0.86
TRAF4-201ENST00000262395 IRS4O14654 1257 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-201ENST00000262395 FAM193AP78312 1265 aa20.44■□□□□ 0.86
TRAF4-201ENST00000262395 NT5DC1Q5TFE4 455 aa20.44■□□□□ 0.86
TRAF4-201ENST00000262395 LCORLQ8N3X6 602 aa20.44■□□□□ 0.86
TRAF4-201ENST00000262395 CRACR2BQ8N4Y2 399 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-201ENST00000262395 SRPRBQ9Y5M8 271 aaKnown RBP20.44■□□□□ 0.86
TRAF4-201ENST00000262395 DDX60Q8IY21 1712 aaKnown RBP20.44■□□□□ 0.86
TRAF4-201ENST00000262395 GSG1L2A8MUP6 293 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 KIF5CO60282 957 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 FXR1P51114 621 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRAF4-201ENST00000262395 CTSWP56202 376 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 APTXQ7Z2E3 356 aaKnown RBP20.43■□□□□ 0.86
TRAF4-201ENST00000262395 SRGAP1Q7Z6B7 1085 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 TXLNBQ8N3L3 684 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 WASF1Q92558 559 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 SHISA4Q96DD7 197 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 VPS18Q9P253 973 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 FBXO3Q9UK99 471 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 SYNRGQ9UMZ2 1314 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 SLC35F6Q8N357 371 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 VGLL2Q8N8G2 317 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 BLZF1Q9H2G9 400 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 RNF216Q9NWF9 866 aaPredicted RBP20.43■□□□□ 0.86
TRAF4-201ENST00000262395 SLC4A4Q9Y6R1 1079 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 MINDY4BA8MYZ0 360 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 ATP8B1O43520 1251 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 ZSCAN26Q16670 478 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 NLRP10Q86W26 655 aa20.43■□□□□ 0.86
TRAF4-201ENST00000262395 PHACTR2O75167 634 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 RASGRF1Q13972 1273 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 SPATA5Q8NB90 893 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 FOXP1Q9H334 677 aaPredicted RBP20.42■□□□□ 0.86
TRAF4-201ENST00000262395 KAT6BQ8WYB5 2073 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 KCPQ6ZWJ8 1503 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 RNF225M0QZC1 329 aaPredicted RBP20.42■□□□□ 0.86
TRAF4-201ENST00000262395 DPYDQ12882 1025 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 GPS2Q13227 327 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 SYMPKQ92797 1274 aaKnown RBP20.42■□□□□ 0.86
TRAF4-201ENST00000262395 VPS16Q9H269 839 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 LCMT1Q9UIC8 334 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 MAPK8IP1Q9UQF2 711 aa20.42■□□□□ 0.86
TRAF4-201ENST00000262395 STK36Q9NRP7 1315 aa20.41■□□□□ 0.86
TRAF4-201ENST00000262395 ERICH2A1L162 156 aa20.41■□□□□ 0.86
TRAF4-201ENST00000262395 TULP2O00295 520 aa20.41■□□□□ 0.86
TRAF4-201ENST00000262395 ZNF174Q15697 407 aa20.41■□□□□ 0.86
TRAF4-201ENST00000262395 ABCB6Q9NP58 842 aa20.41■□□□□ 0.86
TRAF4-201ENST00000262395 CTNND2Q9UQB3 1225 aa20.41■□□□□ 0.86
TRAF4-201ENST00000262395 COL18A1P39060 1754 aa20.41■□□□□ 0.86
TRAF4-201ENST00000262395 ALS2Q96Q42 1657 aa20.41■□□□□ 0.86
TRAF4-201ENST00000262395 DEXIO95424 95 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms