RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SHISA4Q96DD7 197 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 CCDC88AQ3V6T2 1871 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 USP17L3A6NCW0 530 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 USP17L4A6NCW7 530 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 NDUFA8P51970 172 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 USP17L1Q7RTZ2 530 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.71■□□□□ 0.113e-6■■□□□ 12.1
VMP1-201ENST00000262291 VPS54Q9P1Q0 977 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 V9GY48 417 aaPredicted RBP15.71■□□□□ 0.11
VMP1-201ENST00000262291 ZNF500O60304 480 aaPredicted RBP15.7■□□□□ 0.1
VMP1-201ENST00000262291 WDHD1O75717 1129 aaPredicted RBP15.7■□□□□ 0.1
VMP1-201ENST00000262291 SRGNP10124 158 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 TFAP4Q01664 338 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 BRAPQ7Z569 592 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 NLGN1Q8N2Q7 840 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 CLIC6Q96NY7 704 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 CRAMP1Q96RY5 1269 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 NOL10Q9BSC4 688 aaKnown RBP15.7■□□□□ 0.1
VMP1-201ENST00000262291 RTFDC1Q9BY42 306 aaPredicted RBP15.7■□□□□ 0.1
VMP1-201ENST00000262291 FAM205CA6NFA0 338 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 DIS3L2Q8IYB7 885 aaKnown RBP15.7■□□□□ 0.1
VMP1-201ENST00000262291 TMTC2Q8N394 836 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 DNAJC25Q9H1X3 360 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 MROH7-TTC4A0A0A0MT08 1334 aa15.7■□□□□ 0.1
VMP1-201ENST00000262291 VEGFAP15692 232 aaPredicted RBP15.69■□□□□ 0.1
VMP1-201ENST00000262291 SPECC1Q5M775 1068 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 RASGRP2Q7LDG7 609 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 PDLIM2Q96JY6 352 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 CCDC94Q9BW85 323 aaPredicted RBP15.69■□□□□ 0.1
VMP1-201ENST00000262291 KCNQ5Q9NR82 932 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 ARPP21Q9UBL0 812 aaPredicted RBP15.69■□□□□ 0.1
VMP1-201ENST00000262291 PARP3Q9Y6F1 533 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 PLSCR1O15162 318 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 ADCY5O95622 1261 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 IL1R1P14778 569 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 SCNN1DP51172 638 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 C12orf60Q5U649 245 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 TEX11Q8IYF3 940 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 MKNK2Q9HBH9 465 aa15.69■□□□□ 0.1
VMP1-201ENST00000262291 KINO60870 393 aaKnown RBP15.68■□□□□ 0.1
VMP1-201ENST00000262291 BAG3O95817 575 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 PTMAP06454 111 aaKnown RBP15.68■□□□□ 0.1
VMP1-201ENST00000262291 PDE4BQ07343 736 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 TROAPQ12815 778 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 PICALMQ13492 652 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 SASS6Q6UVJ0 657 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 MRPS27Q92552 414 aaKnown RBP15.68■□□□□ 0.1
VMP1-201ENST00000262291 POLR3EQ9NVU0 708 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 MKRN1Q9UHC7 482 aaKnown RBP15.68■□□□□ 0.1
VMP1-201ENST00000262291 ANKRD31Q8N7Z5 1873 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 SLC3A2P08195 630 aaKnown RBP15.68■□□□□ 0.1
VMP1-201ENST00000262291 CHRNA5P30532 468 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 GSTO1P78417 241 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 EN1Q05925 392 aaPredicted RBP15.68■□□□□ 0.1
VMP1-201ENST00000262291 NOM1Q5C9Z4 860 aaKnown RBP15.68■□□□□ 0.1
VMP1-201ENST00000262291 ENGASEQ8NFI3 743 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 ZNF830Q96NB3 372 aaPredicted RBP15.68■□□□□ 0.1
VMP1-201ENST00000262291 PDGFDQ9GZP0 370 aaPredicted RBP15.68■□□□□ 0.1
VMP1-201ENST00000262291 ATP6V0A2Q9Y487 856 aa15.68■□□□□ 0.1
VMP1-201ENST00000262291 MMP1P03956 469 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 FGRP09769 529 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 AKAP17AQ02040 695 aaKnown RBP15.67■□□□□ 0.1
VMP1-201ENST00000262291 FAM160A1Q05DH4 1040 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 EZH2Q15910 746 aaKnown RBP15.67■□□□□ 0.1
VMP1-201ENST00000262291 SP8Q8IXZ3 490 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 CBX8Q9HC52 389 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 IL17RBQ9NRM6 502 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 ZKSCAN5Q9Y2L8 839 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 CCDC196A0A1B0GTZ2 297 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 KLRG2A4D1S0 409 aaPredicted RBP15.67■□□□□ 0.1
VMP1-201ENST00000262291 ORC4O43929 436 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 DEXIO95424 95 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 SLURP2P0DP57 97 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 PKN1Q16512 942 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 ATL3Q6DD88 541 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 ADALQ6DHV7 355 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
VMP1-201ENST00000262291 C15orf52Q6ZUT6 534 aaKnown RBP15.67■□□□□ 0.1
VMP1-201ENST00000262291 MTERF4Q7Z6M4 381 aaKnown RBP15.67■□□□□ 0.1
VMP1-201ENST00000262291 SRBD1Q8N5C6 995 aaKnown RBP15.67■□□□□ 0.1
VMP1-201ENST00000262291 ZC3H12CQ9C0D7 883 aaKnown RBP15.67■□□□□ 0.1
VMP1-201ENST00000262291 DBNDD1Q9H9R9 158 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 STK36Q9NRP7 1315 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 IGSF3O75054 1194 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 SBK1Q52WX2 424 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 ISM2Q6H9L7 571 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 RCSD1Q6JBY9 416 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 C11orf57Q6ZUT1 292 aaPredicted RBP15.67■□□□□ 0.1
VMP1-201ENST00000262291 CERS5Q8N5B7 392 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 KCNG4Q8TDN1 519 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 SDF4Q9BRK5 362 aa15.67■□□□□ 0.1
VMP1-201ENST00000262291 ADAMTS3O15072 1205 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 YEATS4O95619 227 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 LDHCP07864 332 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 TOB1P50616 345 aaPredicted RBP15.66■□□□□ 0.1
VMP1-201ENST00000262291 FUT2Q10981 343 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 EARS2Q5JPH6 523 aaKnown RBP15.66■□□□□ 0.1
VMP1-201ENST00000262291 PPP4R3BQ5MIZ7 849 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms