RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 ATP8B1O43520 1251 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 ACTN4O43707 911 aaKnown RBP19.89■□□□□ 0.77
TRAM1-201ENST00000262213 SARSP49591 514 aaKnown RBP19.89■□□□□ 0.77
TRAM1-201ENST00000262213 RAD51AP2Q09MP3 1159 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 GPS2Q13227 327 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 HLFQ16534 295 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 KIF4BQ2VIQ3 1234 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 WWC2Q6AWC2 1192 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 SGMS1Q86VZ5 419 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 ZBTB38Q8NAP3 1195 aaPredicted RBP19.89■□□□□ 0.77
TRAM1-201ENST00000262213 WASF1Q92558 559 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 PCDH11XQ9BZA7 1347 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 PCDH11YQ9BZA8 1340 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 ANKRD18BA2A2Z9 1011 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 CSF1RP07333 972 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 RHOXF2BP0C7M4 288 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 CD44P16070 742 aaKnown RBP19.88■□□□□ 0.77
TRAM1-201ENST00000262213 IFNAR1P17181 557 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 MFSD6Q6ZSS7 791 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 DNAJC10Q8IXB1 793 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 RHOXF2Q9BQY4 288 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 SUGCTQ9HAC7 445 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 ADGRG1Q9Y653 693 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 KIF5CO60282 957 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 TDO2P48775 406 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 WTAPQ15007 396 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 RILPL1Q5EBL4 403 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 FBXO3Q9UK99 471 aa19.88■□□□□ 0.77
TRAM1-201ENST00000262213 AKAP11Q9UKA4 1901 aa19.87■□□□□ 0.77
TRAM1-201ENST00000262213 CCT6AP40227 531 aaKnown RBP19.87■□□□□ 0.77
TRAM1-201ENST00000262213 A0A087X0B3 334 aa19.87■□□□□ 0.77
TRAM1-201ENST00000262213 A0A1B0GTH6 734 aa19.87■□□□□ 0.77
TRAM1-201ENST00000262213 ABL1P00519 1130 aa19.87■□□□□ 0.77
TRAM1-201ENST00000262213 CASP14P31944 242 aa19.87■□□□□ 0.77
TRAM1-201ENST00000262213 ACRBPQ8NEB7 543 aa19.87■□□□□ 0.77
TRAM1-201ENST00000262213 CDC5LQ99459 802 aaKnown RBP19.87■□□□□ 0.77
TRAM1-201ENST00000262213 PDE11AQ9HCR9 933 aa19.87■□□□□ 0.77
TRAM1-201ENST00000262213 LIFRP42702 1097 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 AKNAD1Q5T1N1 836 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 SRGAP1Q7Z6B7 1085 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 ADAM21Q9UKJ8 722 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 STRCQ7RTU9 1775 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 SYNRGQ9UMZ2 1314 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 TCRBV5S4A2TA0A5A2 114 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 PATL2C9JE40 543 aaKnown RBP19.86■□□□□ 0.77
TRAM1-201ENST00000262213 ZSCAN26Q16670 478 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 NT5DC1Q5TFE4 455 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 PNKPQ96T60 521 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 VPS18Q9P253 973 aa19.86■□□□□ 0.77
TRAM1-201ENST00000262213 ERVV-2B6SEH9 535 aa19.85■□□□□ 0.77
TRAM1-201ENST00000262213 PRDM1O75626 825 aa19.85■□□□□ 0.77
TRAM1-201ENST00000262213 MIGA1Q8NAN2 632 aa19.85■□□□□ 0.77
TRAM1-201ENST00000262213 VPS54Q9P1Q0 977 aa19.85■□□□□ 0.77
TRAM1-201ENST00000262213 SRPRBQ9Y5M8 271 aaKnown RBP19.85■□□□□ 0.77
TRAM1-201ENST00000262213 STK36Q9NRP7 1315 aa19.85■□□□□ 0.77
TRAM1-201ENST00000262213 PDE8BO95263 885 aa19.85■□□□□ 0.77
TRAM1-201ENST00000262213 JAKMIP3Q5VZ66 844 aa19.85■□□□□ 0.77
TRAM1-201ENST00000262213 ANKZF1Q9H8Y5 726 aa19.85■□□□□ 0.77
TRAM1-201ENST00000262213 ABCC12Q96J65 1359 aa19.85■□□□□ 0.77
TRAM1-201ENST00000262213 ERICH2A1L162 156 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 CDC25AP30304 524 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 SLC35F6Q8N357 371 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 PANX2Q96RD6 677 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 FOXP1Q9H334 677 aaPredicted RBP19.84■□□□□ 0.77
TRAM1-201ENST00000262213 TRMT112Q9UI30 125 aaKnown RBP19.84■□□□□ 0.77
TRAM1-201ENST00000262213 KAT6BQ8WYB5 2073 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 ALS2Q96Q42 1657 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 CCDC151A5D8V7 595 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 TULP2O00295 520 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 IRS4O14654 1257 aaPredicted RBP19.84■□□□□ 0.77
TRAM1-201ENST00000262213 N4BP1O75113 896 aaKnown RBP19.84■□□□□ 0.77
TRAM1-201ENST00000262213 CTSWP56202 376 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 CRACR2BQ8N4Y2 399 aaPredicted RBP19.84■□□□□ 0.77
TRAM1-201ENST00000262213 PRDM11Q9NQV5 511 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 STRN4Q9NRL3 753 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 CDC23Q9UJX2 597 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 SLC4A4Q9Y6R1 1079 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 COL18A1P39060 1754 aa19.84■□□□□ 0.77
TRAM1-201ENST00000262213 FXR1P51114 621 aaKnown RBP eCLIP19.83■□□□□ 0.77
TRAM1-201ENST00000262213 SART3Q15020 963 aaKnown RBP19.83■□□□□ 0.77
TRAM1-201ENST00000262213 EARS2Q5JPH6 523 aaKnown RBP19.83■□□□□ 0.77
TRAM1-201ENST00000262213 SPATA1Q5VX52 437 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 LCORLQ8N3X6 602 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 TRIML1Q8N9V2 468 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 AK7Q96M32 723 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 ASAP1Q9ULH1 1129 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 CTNND2Q9UQB3 1225 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 KCPQ6ZWJ8 1503 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 GSG1L2A8MUP6 293 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 SMIM22K7EJ46 135 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 DEXIO95424 95 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 KANK3Q6NY19 840 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 APTXQ7Z2E3 356 aaKnown RBP19.83■□□□□ 0.77
TRAM1-201ENST00000262213 SPATA5Q8NB90 893 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 BLZF1Q9H2G9 400 aa19.83■□□□□ 0.77
TRAM1-201ENST00000262213 RNF216Q9NWF9 866 aaPredicted RBP19.83■□□□□ 0.77
TRAM1-201ENST00000262213 MINDY4BA8MYZ0 360 aa19.83■□□□□ 0.76
TRAM1-201ENST00000262213 ERCC5P28715 1186 aaPredicted RBP19.83■□□□□ 0.76
TRAM1-201ENST00000262213 BRD3Q15059 726 aa19.83■□□□□ 0.76
TRAM1-201ENST00000262213 VGLL2Q8N8G2 317 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms