RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 GRIPAP1Q4V328 841 aa26.05■■□□□ 1.76
SIX3-201ENST00000260653 CMTR1Q8N1G2 835 aaKnown RBP26.05■■□□□ 1.76
SIX3-201ENST00000260653 TFIP11Q9UBB9 837 aaKnown RBP26.05■■□□□ 1.76
SIX3-201ENST00000260653 CDC42EP5Q6NZY7 148 aa26.05■■□□□ 1.76
SIX3-201ENST00000260653 CATIPQ7Z7H3 387 aa26.05■■□□□ 1.76
SIX3-201ENST00000260653 PSMD1Q99460 953 aa26.05■■□□□ 1.76
SIX3-201ENST00000260653 ALG1Q9BT22 464 aa26.05■■□□□ 1.76
SIX3-201ENST00000260653 SLC26A6Q9BXS9 759 aa26.05■■□□□ 1.76
SIX3-201ENST00000260653 PCDHAC2Q9Y5I4 1007 aa26.05■■□□□ 1.76
SIX3-201ENST00000260653 TPRNQ4KMQ1 711 aa26.04■■□□□ 1.76
SIX3-201ENST00000260653 MYH15Q9Y2K3 1946 aa26.04■■□□□ 1.76
SIX3-201ENST00000260653 RASA1P20936 1047 aa26.04■■□□□ 1.76
SIX3-201ENST00000260653 C16orf86Q6ZW13 317 aa26.04■■□□□ 1.76
SIX3-201ENST00000260653 TTC6Q86TZ1 520 aa26.04■■□□□ 1.76
SIX3-201ENST00000260653 CCDC82Q8N4S0 544 aa26.04■■□□□ 1.76
SIX3-201ENST00000260653 ZNF277Q9NRM2 450 aaPredicted RBP26.04■■□□□ 1.76
SIX3-201ENST00000260653 IL17RBQ9NRM6 502 aa26.04■■□□□ 1.76
SIX3-201ENST00000260653 TAOK2Q9UL54 1235 aa26.04■■□□□ 1.76
SIX3-201ENST00000260653 TROAPQ12815 778 aa26.03■■□□□ 1.76
SIX3-201ENST00000260653 RCSD1Q6JBY9 416 aa26.03■■□□□ 1.76
SIX3-201ENST00000260653 CCDC196A0A1B0GTZ2 297 aa26.03■■□□□ 1.76
SIX3-201ENST00000260653 FMNL1O95466 1100 aaPredicted RBP26.03■■□□□ 1.76
SIX3-201ENST00000260653 CDK8P49336 464 aa26.03■■□□□ 1.76
SIX3-201ENST00000260653 TGFB2P61812 414 aa26.03■■□□□ 1.76
SIX3-201ENST00000260653 SSRP1Q08945 709 aaKnown RBP26.03■■□□□ 1.76
SIX3-201ENST00000260653 CSPP1Q1MSJ5 1256 aa26.03■■□□□ 1.76
SIX3-201ENST00000260653 ZDHHC15Q96MV8 337 aa26.03■■□□□ 1.76
SIX3-201ENST00000260653 STK36Q9NRP7 1315 aa26.02■■□□□ 1.76
SIX3-201ENST00000260653 ILDR1Q86SU0 546 aaPredicted RBP26.02■■□□□ 1.76
SIX3-201ENST00000260653 ZNF444Q8N0Y2 327 aaPredicted RBP26.02■■□□□ 1.76
SIX3-201ENST00000260653 PIM2Q9P1W9 311 aa26.02■■□□□ 1.76
SIX3-201ENST00000260653 COL4A5P29400 1685 aa26.02■■□□□ 1.76
SIX3-201ENST00000260653 NBPF11Q86T75 865 aa26.02■■□□□ 1.76
SIX3-201ENST00000260653 TMEM63CQ9P1W3 806 aa26.02■■□□□ 1.76
SIX3-201ENST00000260653 PPP1R1BQ9UD71 204 aaPredicted RBP26.02■■□□□ 1.76
SIX3-201ENST00000260653 TSPY3P0CV98 308 aa26.01■■□□□ 1.75
SIX3-201ENST00000260653 TSPY8P0CW00 308 aa26.01■■□□□ 1.75
SIX3-201ENST00000260653 UBE2HP62256 183 aa26.01■■□□□ 1.75
SIX3-201ENST00000260653 DDAH1O94760 285 aa26■■□□□ 1.75
SIX3-201ENST00000260653 NT5C2P49902 561 aa26■■□□□ 1.75
SIX3-201ENST00000260653 ZNF287Q9HBT7 754 aa26■■□□□ 1.75
SIX3-201ENST00000260653 GUCY1A2P33402 732 aa26■■□□□ 1.75
SIX3-201ENST00000260653 RBM5P52756 815 aaKnown RBP eCLIP26■■□□□ 1.75
SIX3-201ENST00000260653 NFIAQ12857 509 aa26■■□□□ 1.75
SIX3-201ENST00000260653 LARGE2Q8N3Y3 721 aa26■■□□□ 1.75
SIX3-201ENST00000260653 CRACR2BQ8N4Y2 399 aaPredicted RBP26■■□□□ 1.75
SIX3-201ENST00000260653 MRIQ9BWK5 157 aa26■■□□□ 1.75
SIX3-201ENST00000260653 PSME4Q14997 1843 aa26■■□□□ 1.75
SIX3-201ENST00000260653 SCAND2PQ9GZW5 306 aaPredicted RBP25.99■■□□□ 1.75
SIX3-201ENST00000260653 PPP2R5BQ15173 497 aa25.99■■□□□ 1.75
SIX3-201ENST00000260653 SPATA32Q96LK8 384 aa25.99■■□□□ 1.75
SIX3-201ENST00000260653 ELP1O95163 1332 aa25.99■■□□□ 1.75
SIX3-201ENST00000260653 CALM1P0DP23 149 aa25.98■■□□□ 1.75
SIX3-201ENST00000260653 CALM2P0DP24 149 aa25.98■■□□□ 1.75
SIX3-201ENST00000260653 CALM3P0DP25 149 aa25.98■■□□□ 1.75
SIX3-201ENST00000260653 HDLBPQ00341 1268 aaKnown RBP25.98■■□□□ 1.75
SIX3-201ENST00000260653 ZSCAN23Q3MJ62 389 aa25.98■■□□□ 1.75
SIX3-201ENST00000260653 TRIM22Q8IYM9 498 aa25.98■■□□□ 1.75
SIX3-201ENST00000260653 LEO1Q8WVC0 666 aaPredicted RBP25.98■■□□□ 1.75
SIX3-201ENST00000260653 KRT40Q6A162 431 aa25.98■■□□□ 1.75
SIX3-201ENST00000260653 UPF1Q92900 1129 aaKnown RBP eCLIP25.98■■□□□ 1.75
SIX3-201ENST00000260653 FTOQ9C0B1 505 aaKnown RBP eCLIP25.98■■□□□ 1.75
SIX3-201ENST00000260653 OSBPL5Q9H0X9 879 aaPredicted RBP25.98■■□□□ 1.75
SIX3-201ENST00000260653 BRCA1P38398 1863 aaKnown RBP25.98■■□□□ 1.75
SIX3-201ENST00000260653 PLEKHA8P1O95397 391 aa25.97■■□□□ 1.75
SIX3-201ENST00000260653 CACNB3P54284 484 aa25.97■■□□□ 1.75
SIX3-201ENST00000260653 DGKHQ86XP1 1220 aa25.97■■□□□ 1.75
SIX3-201ENST00000260653 SERPINA10Q9UK55 444 aa25.97■■□□□ 1.75
SIX3-201ENST00000260653 MYH6P13533 1939 aa25.97■■□□□ 1.75
SIX3-201ENST00000260653 KIF28PB7ZC32 967 aa25.97■■□□□ 1.75
SIX3-201ENST00000260653 KIF23Q02241 960 aaPredicted RBP25.97■■□□□ 1.75
SIX3-201ENST00000260653 TCP11L1Q9NUJ3 509 aa25.97■■□□□ 1.75
SIX3-201ENST00000260653 PSDA5PKW4 1024 aaPredicted RBP25.96■■□□□ 1.75
SIX3-201ENST00000260653 RAD17O75943 681 aa25.96■■□□□ 1.75
SIX3-201ENST00000260653 CEBPZQ03701 1054 aaKnown RBP25.96■■□□□ 1.75
SIX3-201ENST00000260653 KLHL34Q8N239 644 aa25.96■■□□□ 1.75
SIX3-201ENST00000260653 KAT14Q9H8E8 782 aa25.96■■□□□ 1.75
SIX3-201ENST00000260653 RBM28Q9NW13 759 aaKnown RBP25.96■■□□□ 1.75
SIX3-201ENST00000260653 FUT2Q10981 343 aa25.96■■□□□ 1.75
SIX3-201ENST00000260653 DALRD3Q5D0E6 543 aaKnown RBP25.96■■□□□ 1.75
SIX3-201ENST00000260653 SOGA3Q5TF21 947 aa25.96■■□□□ 1.75
SIX3-201ENST00000260653 SGIP1Q9BQI5 828 aa25.96■■□□□ 1.75
SIX3-201ENST00000260653 GABPAQ06546 454 aa25.95■■□□□ 1.75
SIX3-201ENST00000260653 RGS22Q8NE09 1264 aa25.95■■□□□ 1.75
SIX3-201ENST00000260653 WASF1Q92558 559 aa25.95■■□□□ 1.75
SIX3-201ENST00000260653 CFAP45Q9UL16 551 aa25.95■■□□□ 1.75
SIX3-201ENST00000260653 DEXIO95424 95 aa25.95■■□□□ 1.74
SIX3-201ENST00000260653 PNMA1Q8ND90 353 aa25.95■■□□□ 1.74
SIX3-201ENST00000260653 CTCFLQ8NI51 663 aaPredicted RBP25.95■■□□□ 1.74
SIX3-201ENST00000260653 ANKS1AQ92625 1134 aa25.95■■□□□ 1.74
SIX3-201ENST00000260653 USP28Q96RU2 1077 aa25.95■■□□□ 1.74
SIX3-201ENST00000260653 FSD2A1L4K1 749 aa25.94■■□□□ 1.74
SIX3-201ENST00000260653 TMTC3Q6ZXV5 915 aa25.94■■□□□ 1.74
SIX3-201ENST00000260653 GAS2L3Q86XJ1 694 aa25.94■■□□□ 1.74
SIX3-201ENST00000260653 ZFPM1Q8IX07 1006 aa25.94■■□□□ 1.74
SIX3-201ENST00000260653 STX8Q9UNK0 236 aa25.94■■□□□ 1.74
SIX3-201ENST00000260653 BAZ2BQ9UIF8 2168 aaKnown RBP25.94■■□□□ 1.74
SIX3-201ENST00000260653 PSMD14O00487 310 aa25.94■■□□□ 1.74
SIX3-201ENST00000260653 TRIM29Q14134 588 aa25.94■■□□□ 1.74
SIX3-201ENST00000260653 CCDC178Q5BJE1 867 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms