RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.51■■□□□ 1.51
RTCA-201ENST00000260563 ZKSCAN4Q969J2 545 aaPredicted RBP24.51■■□□□ 1.51
RTCA-201ENST00000260563 KIF2CQ99661 725 aa24.51■■□□□ 1.51
RTCA-201ENST00000260563 GDF11O95390 407 aa24.5■■□□□ 1.51
RTCA-201ENST00000260563 CAP2P40123 477 aa24.5■■□□□ 1.51
RTCA-201ENST00000260563 NOL9Q5SY16 702 aaKnown RBP24.5■■□□□ 1.51
RTCA-201ENST00000260563 TBC1D10CQ8IV04 446 aa24.5■■□□□ 1.51
RTCA-201ENST00000260563 SCYL3Q8IZE3 742 aa24.5■■□□□ 1.51
RTCA-201ENST00000260563 STAG1Q8WVM7 1258 aa24.5■■□□□ 1.51
RTCA-201ENST00000260563 NBPF3Q9H094 633 aa24.5■■□□□ 1.51
RTCA-201ENST00000260563 RNF41Q9H4P4 317 aaPredicted RBP24.5■■□□□ 1.51
RTCA-201ENST00000260563 SNX14Q9Y5W7 946 aa24.5■■□□□ 1.51
RTCA-201ENST00000260563 PRDM1O75626 825 aa24.49■■□□□ 1.51
RTCA-201ENST00000260563 CYP21A2P08686 494 aa24.49■■□□□ 1.51
RTCA-201ENST00000260563 PCP11498 1178 aaKnown RBP24.49■■□□□ 1.51
RTCA-201ENST00000260563 ZKSCAN1P17029 563 aaPredicted RBP24.49■■□□□ 1.51
RTCA-201ENST00000260563 RRP1BQ14684 758 aaKnown RBP24.49■■□□□ 1.51
RTCA-201ENST00000260563 AKNAD1Q5T1N1 836 aa24.49■■□□□ 1.51
RTCA-201ENST00000260563 RASEFQ8IZ41 740 aa24.49■■□□□ 1.51
RTCA-201ENST00000260563 IL17RAQ96F46 866 aa24.49■■□□□ 1.51
RTCA-201ENST00000260563 MFSD6Q6ZSS7 791 aa24.48■■□□□ 1.51
RTCA-201ENST00000260563 CLMNQ96JQ2 1002 aa24.48■■□□□ 1.51
RTCA-201ENST00000260563 TOMM22Q9NS69 142 aa24.48■■□□□ 1.51
RTCA-201ENST00000260563 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.48■■□□□ 1.51
RTCA-201ENST00000260563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.48■■□□□ 1.51
RTCA-201ENST00000260563 SNCAIPQ9Y6H5 919 aa24.48■■□□□ 1.51
RTCA-201ENST00000260563 MYH4Q9Y623 1939 aa24.48■■□□□ 1.51
RTCA-201ENST00000260563 HSPA6P17066 643 aa24.47■■□□□ 1.51
RTCA-201ENST00000260563 RASA1P20936 1047 aa24.47■■□□□ 1.51
RTCA-201ENST00000260563 ABCB5Q2M3G0 1257 aa24.47■■□□□ 1.51
RTCA-201ENST00000260563 ELP3Q9H9T3 547 aa24.47■■□□□ 1.51
RTCA-201ENST00000260563 PICK1Q9NRD5 415 aa24.47■■□□□ 1.51
RTCA-201ENST00000260563 PTPRFP10586 1907 aa24.47■■□□□ 1.51
RTCA-201ENST00000260563 MPHOSPH10O00566 681 aaKnown RBP24.46■■□□□ 1.51
RTCA-201ENST00000260563 ZNF444Q8N0Y2 327 aaPredicted RBP24.46■■□□□ 1.51
RTCA-201ENST00000260563 HHIPL1Q96JK4 782 aa24.46■■□□□ 1.51
RTCA-201ENST00000260563 CCDC17Q96LX7 622 aa24.46■■□□□ 1.51
RTCA-201ENST00000260563 CABP5Q9NP86 173 aa24.46■■□□□ 1.51
RTCA-201ENST00000260563 GINM1Q9NU53 330 aa24.46■■□□□ 1.51
RTCA-201ENST00000260563 ZBTB21Q9ULJ3 1066 aa24.46■■□□□ 1.51
RTCA-201ENST00000260563 NEDD4P46934 1319 aa24.46■■□□□ 1.51
RTCA-201ENST00000260563 ORC4O43929 436 aa24.45■■□□□ 1.51
RTCA-201ENST00000260563 ASNSP08243 561 aa24.45■■□□□ 1.51
RTCA-201ENST00000260563 FGRP09769 529 aa24.45■■□□□ 1.51
RTCA-201ENST00000260563 TSGA10IPQ3SY00 556 aa24.45■■□□□ 1.51
RTCA-201ENST00000260563 RRP12Q5JTH9 1297 aaKnown RBP24.45■■□□□ 1.51
RTCA-201ENST00000260563 RGMBQ6NW40 437 aa24.45■■□□□ 1.51
RTCA-201ENST00000260563 INCENPQ9NQS7 918 aa24.45■■□□□ 1.51
RTCA-201ENST00000260563 TACC3Q9Y6A5 838 aa24.45■■□□□ 1.51
RTCA-201ENST00000260563 GH2P01242 217 aa24.45■■□□□ 1.5
RTCA-201ENST00000260563 AKR1B1P15121 316 aa24.45■■□□□ 1.5
RTCA-201ENST00000260563 SLC10A4Q96EP9 437 aa24.45■■□□□ 1.5
RTCA-201ENST00000260563 ZNF157P51786 506 aaPredicted RBP24.44■■□□□ 1.5
RTCA-201ENST00000260563 SHROOM1Q2M3G4 852 aaPredicted RBP24.44■■□□□ 1.5
RTCA-201ENST00000260563 PAXIP1Q6ZW49 1069 aaPredicted RBP24.44■■□□□ 1.5
RTCA-201ENST00000260563 CNNM2Q9H8M5 875 aa24.44■■□□□ 1.5
RTCA-201ENST00000260563 TAF6LQ9Y6J9 622 aa24.44■■□□□ 1.5
RTCA-201ENST00000260563 PLIN4Q96Q06 1357 aa24.44■■□□□ 1.5
RTCA-201ENST00000260563 RASSF10A6NK89 507 aa24.43■■□□□ 1.5
RTCA-201ENST00000260563 RANBP6O60518 1105 aaKnown RBP24.43■■□□□ 1.5
RTCA-201ENST00000260563 TSPY3P0CV98 308 aa24.43■■□□□ 1.5
RTCA-201ENST00000260563 TSPY8P0CW00 308 aa24.43■■□□□ 1.5
RTCA-201ENST00000260563 ANP32AP39687 249 aaKnown RBP24.43■■□□□ 1.5
RTCA-201ENST00000260563 KRT32Q14532 448 aa24.43■■□□□ 1.5
RTCA-201ENST00000260563 RABEP1Q15276 862 aa24.43■■□□□ 1.5
RTCA-201ENST00000260563 TMEM179Q6ZVK1 233 aa24.43■■□□□ 1.5
RTCA-201ENST00000260563 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.43■■□□□ 1.5
RTCA-201ENST00000260563 SPDYE5A6NIY4 337 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 TSPY2A6NKD2 308 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 E7EWF7 191 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 PTPRAP18433 802 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 NT5C2P49902 561 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 JAG1P78504 1218 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 HTRA3P83110 453 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 TRDNQ13061 729 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 RAB3GAP1Q15042 981 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 ERO1BQ86YB8 467 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 RASAL3Q86YV0 1011 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 OPTNQ96CV9 577 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 KRT23Q9C075 422 aa24.42■■□□□ 1.5
RTCA-201ENST00000260563 DEFB115Q30KQ5 88 aa24.41■■□□□ 1.5
RTCA-201ENST00000260563 ADCK5Q3MIX3 580 aa24.41■■□□□ 1.5
RTCA-201ENST00000260563 FAM47AQ5JRC9 791 aa24.41■■□□□ 1.5
RTCA-201ENST00000260563 ESR2Q92731 530 aa24.41■■□□□ 1.5
RTCA-201ENST00000260563 OTUD5Q96G74 571 aa24.41■■□□□ 1.5
RTCA-201ENST00000260563 USP17L5A8MUK1 530 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 TFAP4Q01664 338 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 PPATQ06203 517 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 STOX1Q6ZVD7 989 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 RALYLQ86SE5 291 aaKnown RBP24.4■■□□□ 1.5
RTCA-201ENST00000260563 WNK4Q96J92 1243 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 JAKMIP1Q96N16 626 aaKnown RBP24.4■■□□□ 1.5
RTCA-201ENST00000260563 TBC1D2Q9BYX2 928 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 AS3MTQ9HBK9 375 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 B4E1Z4 1266 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 SLC10A3P09131 477 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 PSMA5P28066 241 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 SEPT2Q15019 361 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 CCDC84Q86UT8 332 aaPredicted RBP24.4■■□□□ 1.5
RTCA-201ENST00000260563 NCOA7Q8NI08 942 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms