RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PDE4BQ07343 736 aa32.2■■■□□ 2.74
CCM2-201ENST00000258781 DDX60LQ5H9U9 1706 aaKnown RBP32.19■■■□□ 2.74
CCM2-201ENST00000258781 LARGE2Q8N3Y3 721 aa32.19■■■□□ 2.74
CCM2-201ENST00000258781 ENAHQ8N8S7 591 aaPredicted RBP32.19■■■□□ 2.74
CCM2-201ENST00000258781 ALG1Q9BT22 464 aa32.19■■■□□ 2.74
CCM2-201ENST00000258781 SUGT1Q9Y2Z0 365 aa32.19■■■□□ 2.74
CCM2-201ENST00000258781 CYP2D6P10635 497 aa32.18■■■□□ 2.74
CCM2-201ENST00000258781 PLCG2P16885 1265 aa32.18■■■□□ 2.74
CCM2-201ENST00000258781 DACT2Q5SW24 774 aa32.18■■■□□ 2.74
CCM2-201ENST00000258781 C12orf60Q5U649 245 aa32.18■■■□□ 2.74
CCM2-201ENST00000258781 STRIP1Q5VSL9 837 aa32.18■■■□□ 2.74
CCM2-201ENST00000258781 BRAPQ7Z569 592 aa32.18■■■□□ 2.74
CCM2-201ENST00000258781 TAOK3Q9H2K8 898 aa32.18■■■□□ 2.74
CCM2-201ENST00000258781 GAKO14976 1311 aa32.18■■■□□ 2.74
CCM2-201ENST00000258781 F8W031 263 aaPredicted RBP32.18■■■□□ 2.74
CCM2-201ENST00000258781 FMNL1O95466 1100 aaPredicted RBP32.18■■■□□ 2.74
CCM2-201ENST00000258781 SSRP1Q08945 709 aaKnown RBP32.18■■■□□ 2.74
CCM2-201ENST00000258781 FOCADQ5VW36 1801 aa32.18■■■□□ 2.74
CCM2-201ENST00000258781 PRDM1O75626 825 aa32.17■■■□□ 2.74
CCM2-201ENST00000258781 BTDP43251 543 aa32.17■■■□□ 2.74
CCM2-201ENST00000258781 AMOTL1Q8IY63 956 aa32.17■■■□□ 2.74
CCM2-201ENST00000258781 PHKBQ93100 1093 aa32.17■■■□□ 2.74
CCM2-201ENST00000258781 RCOR1Q9UKL0 485 aa32.17■■■□□ 2.74
CCM2-201ENST00000258781 GOLGA6L4A6NEF3 574 aa32.16■■■□□ 2.74
CCM2-201ENST00000258781 USP17L8P0C7I0 530 aa32.16■■■□□ 2.74
CCM2-201ENST00000258781 OTUD7BQ6GQQ9 843 aa32.16■■■□□ 2.74
CCM2-201ENST00000258781 WASF1Q92558 559 aa32.16■■■□□ 2.74
CCM2-201ENST00000258781 USP17L3A6NCW0 530 aa32.16■■■□□ 2.74
CCM2-201ENST00000258781 USP17L4A6NCW7 530 aa32.16■■■□□ 2.74
CCM2-201ENST00000258781 IFIT1BQ5T764 474 aaKnown RBP32.16■■■□□ 2.74
CCM2-201ENST00000258781 USP17L1Q7RTZ2 530 aa32.16■■■□□ 2.74
CCM2-201ENST00000258781 FANCBQ8NB91 859 aa32.16■■■□□ 2.74
CCM2-201ENST00000258781 EVX2Q03828 476 aa32.15■■■□□ 2.74
CCM2-201ENST00000258781 MYH6P13533 1939 aa32.15■■■□□ 2.74
CCM2-201ENST00000258781 PANK2Q9BZ23 570 aa32.14■■■□□ 2.74
CCM2-201ENST00000258781 VPS33BQ9H267 617 aa32.14■■■□□ 2.74
CCM2-201ENST00000258781 TTF2Q9UNY4 1162 aaKnown RBP32.14■■■□□ 2.74
CCM2-201ENST00000258781 KIF23Q02241 960 aaPredicted RBP32.14■■■□□ 2.74
CCM2-201ENST00000258781 TRIM22Q8IYM9 498 aa32.14■■■□□ 2.74
CCM2-201ENST00000258781 SLC26A6Q9BXS9 759 aa32.14■■■□□ 2.74
CCM2-201ENST00000258781 CALM1P0DP23 149 aa32.13■■■□□ 2.73
CCM2-201ENST00000258781 CALM2P0DP24 149 aa32.13■■■□□ 2.73
CCM2-201ENST00000258781 CALM3P0DP25 149 aa32.13■■■□□ 2.73
CCM2-201ENST00000258781 CATIPQ7Z7H3 387 aa32.13■■■□□ 2.73
CCM2-201ENST00000258781 TGFBRAP1Q8WUH2 860 aa32.13■■■□□ 2.73
CCM2-201ENST00000258781 USP28Q96RU2 1077 aa32.13■■■□□ 2.73
CCM2-201ENST00000258781 FKBP1AP62942 108 aaKnown RBP32.12■■■□□ 2.73
CCM2-201ENST00000258781 TPRNQ4KMQ1 711 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 PGBD1Q96JS3 809 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 MYH1P12882 1939 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 DDAH1O94760 285 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 RASSF7Q02833 373 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 TRIM29Q14134 588 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 KRT40Q6A162 431 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 NUP133Q8WUM0 1156 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 AIFM3Q96NN9 605 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 TSPY26PQ9H489 355 aa32.12■■■□□ 2.73
CCM2-201ENST00000258781 SCNN1DP51172 638 aa32.11■■■□□ 2.73
CCM2-201ENST00000258781 NBPF11Q86T75 865 aa32.11■■■□□ 2.73
CCM2-201ENST00000258781 TEX11Q8IYF3 940 aa32.11■■■□□ 2.73
CCM2-201ENST00000258781 CRACR2BQ8N4Y2 399 aaPredicted RBP32.11■■■□□ 2.73
CCM2-201ENST00000258781 SYT17Q9BSW7 474 aa32.11■■■□□ 2.73
CCM2-201ENST00000258781 RTEL1Q9NZ71 1219 aa32.11■■■□□ 2.73
CCM2-201ENST00000258781 DAGLAQ9Y4D2 1042 aa32.11■■■□□ 2.73
CCM2-201ENST00000258781 NASPP49321 788 aaPredicted RBP32.1■■■□□ 2.73
CCM2-201ENST00000258781 PRELPP51888 382 aa32.1■■■□□ 2.73
CCM2-201ENST00000258781 KIAA0825Q8IV33 1275 aa32.1■■■□□ 2.73
CCM2-201ENST00000258781 RBSNQ9H1K0 784 aa32.1■■■□□ 2.73
CCM2-201ENST00000258781 GJB4Q9NTQ9 266 aa32.1■■■□□ 2.73
CCM2-201ENST00000258781 RHBDL3P58872 404 aa32.1■■■□□ 2.73
CCM2-201ENST00000258781 RBM28Q9NW13 759 aaKnown RBP32.1■■■□□ 2.73
CCM2-201ENST00000258781 RAD17O75943 681 aa32.09■■■□□ 2.73
CCM2-201ENST00000258781 DEXIO95424 95 aa32.09■■■□□ 2.73
CCM2-201ENST00000258781 MYSM1Q5VVJ2 828 aa32.09■■■□□ 2.73
CCM2-201ENST00000258781 NIM1KQ8IY84 436 aa32.09■■■□□ 2.73
CCM2-201ENST00000258781 LTBP3Q9NS15 1303 aa32.09■■■□□ 2.73
CCM2-201ENST00000258781 TSPY2A6NKD2 308 aa32.08■■■□□ 2.73
CCM2-201ENST00000258781 LIG1P18858 919 aa32.08■■■□□ 2.73
CCM2-201ENST00000258781 MAPKAPK5Q8IW41 473 aa32.08■■■□□ 2.73
CCM2-201ENST00000258781 KIF28PB7ZC32 967 aa32.08■■■□□ 2.73
CCM2-201ENST00000258781 CEBPZQ03701 1054 aaKnown RBP32.08■■■□□ 2.73
CCM2-201ENST00000258781 FAM47AQ5JRC9 791 aa32.08■■■□□ 2.73
CCM2-201ENST00000258781 DDX19AQ9NUU7 478 aaKnown RBP32.08■■■□□ 2.73
CCM2-201ENST00000258781 ZNRF3Q9ULT6 936 aa32.08■■■□□ 2.73
CCM2-201ENST00000258781 POLR3DP05423 398 aaPredicted RBP32.07■■■□□ 2.72
CCM2-201ENST00000258781 TROAPQ12815 778 aa32.07■■■□□ 2.72
CCM2-201ENST00000258781 CCDC178Q5BJE1 867 aa32.07■■■□□ 2.72
CCM2-201ENST00000258781 RNF26Q9BY78 433 aaPredicted RBP32.07■■■□□ 2.72
CCM2-201ENST00000258781 FTOQ9C0B1 505 aaKnown RBP eCLIP32.07■■■□□ 2.72
CCM2-201ENST00000258781 POLR3EQ9NVU0 708 aa32.07■■■□□ 2.72
CCM2-201ENST00000258781 PSMD14O00487 310 aa32.06■■■□□ 2.72
CCM2-201ENST00000258781 BICD2Q8TD16 824 aa32.06■■■□□ 2.72
CCM2-201ENST00000258781 ZNF287Q9HBT7 754 aa32.06■■■□□ 2.72
CCM2-201ENST00000258781 FLT1P17948 1338 aa32.06■■■□□ 2.72
CCM2-201ENST00000258781 YEATS4O95619 227 aa32.06■■■□□ 2.72
CCM2-201ENST00000258781 DYNLL2Q96FJ2 89 aa32.05■■■□□ 2.72
CCM2-201ENST00000258781 MKNK2Q9HBH9 465 aa32.05■■■□□ 2.72
CCM2-201ENST00000258781 U2AF2P26368 475 aaKnown RBP eCLIP32.04■■■□□ 2.72
CCM2-201ENST00000258781 ANKS1AQ92625 1134 aa32.04■■■□□ 2.72
CCM2-201ENST00000258781 VIL1P09327 827 aaKnown RBP32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms