RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 LRRIQ3A6PVS8 624 aaPredicted RBP16.78■□□□□ 0.28
MSI1-201ENST00000257552 FOXP2O15409 715 aa16.78■□□□□ 0.28
MSI1-201ENST00000257552 SLC9C2Q5TAH2 1124 aa16.78■□□□□ 0.28
MSI1-201ENST00000257552 NOA1Q8NC60 698 aaKnown RBP16.78■□□□□ 0.28
MSI1-201ENST00000257552 GDAP1L1Q96MZ0 367 aa16.78■□□□□ 0.28
MSI1-201ENST00000257552 SENP2Q9HC62 589 aa16.78■□□□□ 0.28
MSI1-201ENST00000257552 RAB21Q9UL25 225 aa16.78■□□□□ 0.28
MSI1-201ENST00000257552 CYP19A1P11511 503 aaPredicted RBP16.77■□□□□ 0.28
MSI1-201ENST00000257552 METAP2P50579 478 aaKnown RBP eCLIP16.77■□□□□ 0.28
MSI1-201ENST00000257552 IFIT5Q13325 482 aaKnown RBP16.77■□□□□ 0.28
MSI1-201ENST00000257552 COBLO75128 1261 aa16.77■□□□□ 0.28
MSI1-201ENST00000257552 USP5P45974 858 aa16.77■□□□□ 0.28
MSI1-201ENST00000257552 NR1I3Q14994 352 aa16.77■□□□□ 0.28
MSI1-201ENST00000257552 TNS2Q63HR2 1409 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 EP400Q96L91 3159 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 CTAGE15A4D2H0 777 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 SNAP23O00161 211 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 ZNF213O14771 459 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 MYO1BO43795 1136 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 CTAGE8P0CG41 777 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 SCARF1Q14162 830 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 SMIM5Q71RC9 77 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 CTAGE6Q86UF2 777 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 CTAGE4Q8IX94 777 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 MSANTD4Q8NCY6 345 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 HELBQ8NG08 1087 aaPredicted RBP16.77■□□□□ 0.27
MSI1-201ENST00000257552 SEC31BQ9NQW1 1179 aa16.77■□□□□ 0.27
MSI1-201ENST00000257552 HOOK1Q9UJC3 728 aaKnown RBP16.77■□□□□ 0.27
MSI1-201ENST00000257552 MAP3K15Q6ZN16 1313 aa16.76■□□□□ 0.27
MSI1-201ENST00000257552 POTEB2H3BUK9 544 aa16.76■□□□□ 0.27
MSI1-201ENST00000257552 MDM2Q00987 491 aaPredicted RBP16.76■□□□□ 0.27
MSI1-201ENST00000257552 TRDNQ13061 729 aa16.76■□□□□ 0.27
MSI1-201ENST00000257552 DDB1Q16531 1140 aa16.76■□□□□ 0.27
MSI1-201ENST00000257552 CTR9Q6PD62 1173 aa16.76■□□□□ 0.27
MSI1-201ENST00000257552 GIGYF2Q6Y7W6 1299 aaKnown RBP16.76■□□□□ 0.27
MSI1-201ENST00000257552 LDHAL6AQ6ZMR3 332 aa16.76■□□□□ 0.27
MSI1-201ENST00000257552 KRI1Q8N9T8 703 aaKnown RBP16.76■□□□□ 0.27
MSI1-201ENST00000257552 ENOX1Q8TC92 643 aaKnown RBP16.76■□□□□ 0.27
MSI1-201ENST00000257552 AKAP17AQ02040 695 aaKnown RBP16.76■□□□□ 0.27
MSI1-201ENST00000257552 TRIM29Q14134 588 aa16.76■□□□□ 0.27
MSI1-201ENST00000257552 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
MSI1-201ENST00000257552 NCAPH2Q6IBW4 605 aa16.76■□□□□ 0.27
MSI1-201ENST00000257552 NLRP10Q86W26 655 aa16.76■□□□□ 0.27
MSI1-201ENST00000257552 DZIP3Q86Y13 1208 aaKnown RBP16.76■□□□□ 0.27
MSI1-201ENST00000257552 ZBTB38Q8NAP3 1195 aaPredicted RBP16.76■□□□□ 0.27
MSI1-201ENST00000257552 PUS7LQ9H0K6 701 aaKnown RBP16.76■□□□□ 0.27
MSI1-201ENST00000257552 ITGA6P23229 1130 aa16.75■□□□□ 0.27
MSI1-201ENST00000257552 CASP14P31944 242 aa16.75■□□□□ 0.27
MSI1-201ENST00000257552 ABCA3Q99758 1704 aa16.75■□□□□ 0.27
MSI1-201ENST00000257552 TOGARAM1Q9Y4F4 1720 aa16.75■□□□□ 0.27
MSI1-201ENST00000257552 E2F4Q16254 413 aa16.75■□□□□ 0.27
MSI1-201ENST00000257552 PAXIP1Q6ZW49 1069 aaPredicted RBP16.75■□□□□ 0.27
MSI1-201ENST00000257552 MLKLQ8NB16 471 aa16.75■□□□□ 0.27
MSI1-201ENST00000257552 FAM71BQ8TC56 605 aa16.75■□□□□ 0.27
MSI1-201ENST00000257552 RIN2Q8WYP3 895 aaPredicted RBP16.75■□□□□ 0.27
MSI1-201ENST00000257552 XAGE2Q96GT9 111 aa16.75■□□□□ 0.27
MSI1-201ENST00000257552 CASP1P29466 404 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 METTL24Q5JXM2 366 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 FBXL16Q8N461 479 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
MSI1-201ENST00000257552 KCNQ2O43526 872 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 RNF40O75150 1001 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 ATP6V1AP38606 617 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 NFXL1Q6ZNB6 911 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 USP49Q70CQ1 688 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 PANX2Q96RD6 677 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 RABEP2Q9H5N1 569 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 MYH15Q9Y2K3 1946 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 SHANK3Q9BYB0 1731 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 BTBD18B2RXH4 712 aa16.74■□□□□ 0.27
MSI1-201ENST00000257552 MKRN1Q9UHC7 482 aaKnown RBP16.74■□□□□ 0.27
MSI1-201ENST00000257552 LOC102724159A0A0B4J2E5 919 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 A0A1B0GTH6 734 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 APPP05067 770 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 PCCAP05165 728 aaPredicted RBP16.73■□□□□ 0.27
MSI1-201ENST00000257552 IARSP41252 1262 aaKnown RBP16.73■□□□□ 0.27
MSI1-201ENST00000257552 AFMP43652 599 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 CORO7P57737 925 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 PWP2Q15269 919 aaKnown RBP16.73■□□□□ 0.27
MSI1-201ENST00000257552 SMYD4Q8IYR2 804 aaPredicted RBP16.73■□□□□ 0.27
MSI1-201ENST00000257552 NAPGQ99747 312 aaPredicted RBP16.73■□□□□ 0.27
MSI1-201ENST00000257552 SLC26A6Q9BXS9 759 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 DACH1Q9UI36 760 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 BCL9O00512 1426 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 FAM237AA0A1B0GTK4 181 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 MORC3Q14149 939 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 CYB5R4Q7L1T6 521 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 TTLL11Q8NHH1 800 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 PPM1EQ8WY54 764 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 HINFPQ9BQA5 517 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 INCENPQ9NQS7 918 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 KCNJ14Q9UNX9 436 aa16.73■□□□□ 0.27
MSI1-201ENST00000257552 RPS6KA5O75582 802 aa16.72■□□□□ 0.27
MSI1-201ENST00000257552 ZMYND10O75800 440 aa16.72■□□□□ 0.27
MSI1-201ENST00000257552 CDC25AP30304 524 aa16.72■□□□□ 0.27
MSI1-201ENST00000257552 FXR1P51114 621 aaKnown RBP eCLIP16.72■□□□□ 0.27
MSI1-201ENST00000257552 CPLX2Q6PUV4 134 aaKnown RBP16.72■□□□□ 0.27
MSI1-201ENST00000257552 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms