RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 CCAR2Q8N163 923 aaKnown RBP12.91□□□□□ -0.34
PDE6B-201ENST00000255622 KCNJ14Q9UNX9 436 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 SLC12A7Q9Y666 1083 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 NEBLO76041 1014 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 UQCRFS1P1P0C7P4 283 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 SCP2P22307 547 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDE6B-201ENST00000255622 RPS6KL1Q9Y6S9 549 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 WTIPA6NIX2 430 aaPredicted RBP12.91□□□□□ -0.34
PDE6B-201ENST00000255622 GSG1L2A8MUP6 293 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 NEMFO60524 1076 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 IPO7O95373 1038 aaKnown RBP12.91□□□□□ -0.34
PDE6B-201ENST00000255622 GRIN1Q05586 938 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 LONRF3Q496Y0 759 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 HSP90AA4PQ58FG1 418 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 NOM1Q5C9Z4 860 aaKnown RBP12.91□□□□□ -0.34
PDE6B-201ENST00000255622 ARMC3Q5W041 872 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 BPIFA3Q9BQP9 254 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 HPSEQ9Y251 543 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 BTBD18B2RXH4 712 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 NPHP1O15259 732 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 DPF2Q92785 391 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 PAXBP1Q9Y5B6 917 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 SLC5A1P13866 664 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 GOLGA8FQ08AF8 430 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 GOLGA8DPQ0D2H9 430 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 TRIM29Q14134 588 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 E4F1Q66K89 784 aaPredicted RBP12.9□□□□□ -0.34
PDE6B-201ENST00000255622 CPLX2Q6PUV4 134 aaKnown RBP12.9□□□□□ -0.34
PDE6B-201ENST00000255622 RINLQ6ZS11 566 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 PACS2Q86VP3 889 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 METTL16Q86W50 562 aaKnown RBP12.9□□□□□ -0.34
PDE6B-201ENST00000255622 FOXP4Q8IVH2 680 aaPredicted RBP12.9□□□□□ -0.34
PDE6B-201ENST00000255622 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
PDE6B-201ENST00000255622 MAP9Q49MG5 647 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 OSBPL5Q9H0X9 879 aaPredicted RBP12.89□□□□□ -0.35
PDE6B-201ENST00000255622 SLC4A4Q9Y6R1 1079 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 COL4A1P02462 1669 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 LRP5O75197 1615 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 CHD4Q14839 1912 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
PDE6B-201ENST00000255622 SSRP1Q08945 709 aaKnown RBP12.89□□□□□ -0.35
PDE6B-201ENST00000255622 AKNAD1Q5T1N1 836 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 ADGRA1Q86SQ6 560 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 STRCQ7RTU9 1775 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 PPP6R2O75170 966 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 FANCCQ00597 558 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 MFSD6Q6ZSS7 791 aa12.89□□□□□ -0.35
PDE6B-201ENST00000255622 ZNF215Q9UL58 517 aaPredicted RBP12.89□□□□□ -0.35
PDE6B-201ENST00000255622 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
PDE6B-201ENST00000255622 ERVV-1B6SEH8 477 aa12.88□□□□□ -0.35
PDE6B-201ENST00000255622 EXOC5O00471 708 aa12.88□□□□□ -0.35
PDE6B-201ENST00000255622 TOB1P50616 345 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-201ENST00000255622 GSDMDP57764 484 aa12.88□□□□□ -0.35
PDE6B-201ENST00000255622 NR5A1Q13285 461 aa12.88□□□□□ -0.35
PDE6B-201ENST00000255622 FMNL1O95466 1100 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-201ENST00000255622 BMP6P22004 513 aa12.88□□□□□ -0.35
PDE6B-201ENST00000255622 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
PDE6B-201ENST00000255622 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
PDE6B-201ENST00000255622 SFPQP23246 707 aaKnown RBP eCLIP12.87□□□□□ -0.35
PDE6B-201ENST00000255622 LIFRP42702 1097 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 PDE4BQ07343 736 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 ALX1Q15699 326 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
PDE6B-201ENST00000255622 NOSTRINQ8IVI9 506 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 DIS3L2Q8IYB7 885 aaKnown RBP12.87□□□□□ -0.35
PDE6B-201ENST00000255622 NUP133Q8WUM0 1156 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 CWC15Q9P013 229 aaKnown RBP12.87□□□□□ -0.35
PDE6B-201ENST00000255622 KCNH3Q9ULD8 1083 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 ARAP2Q8WZ64 1704 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 NHSL1Q5SYE7 1610 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 KLHL33A6NCF5 533 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 TMEM232C9JQI7 657 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 GRAMD1CQ8IYS0 662 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 CNNM3Q8NE01 707 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 PPP1R13BQ96KQ4 1090 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 IMPACTQ9P2X3 320 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 RRP15Q9Y3B9 282 aaKnown RBP12.87□□□□□ -0.35
PDE6B-201ENST00000255622 PCDHA5Q9Y5H7 936 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 DOCK2Q92608 1830 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 PSMD2Q13200 908 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 ZSCAN26Q16670 478 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 TEX35Q5T0J7 233 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 BSDC1Q9NW68 430 aaPredicted RBP12.87□□□□□ -0.35
PDE6B-201ENST00000255622 LRP2BPQ9P2M1 347 aa12.87□□□□□ -0.35
PDE6B-201ENST00000255622 SERPINC1P01008 464 aa12.86□□□□□ -0.35
PDE6B-201ENST00000255622 MMP1P03956 469 aa12.86□□□□□ -0.35
PDE6B-201ENST00000255622 PAX7P23759 505 aa12.86□□□□□ -0.35
PDE6B-201ENST00000255622 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms