RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 DDX60Q8IY21 1712 aaKnown RBP23.13■■□□□ 1.29
RARA-201ENST00000254066 NGLY1Q96IV0 654 aa23.13■■□□□ 1.29
RARA-201ENST00000254066 LGR6Q9HBX8 967 aa23.13■■□□□ 1.29
RARA-201ENST00000254066 TFCP2Q12800 502 aa23.13■■□□□ 1.29
RARA-201ENST00000254066 NBPF14Q5TI25 921 aa23.13■■□□□ 1.29
RARA-201ENST00000254066 APTXQ7Z2E3 356 aaKnown RBP23.13■■□□□ 1.29
RARA-201ENST00000254066 VPS37DQ86XT2 251 aa23.13■■□□□ 1.29
RARA-201ENST00000254066 CLIC6Q96NY7 704 aa23.13■■□□□ 1.29
RARA-201ENST00000254066 SUFUQ9UMX1 484 aa23.13■■□□□ 1.29
RARA-201ENST00000254066 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
RARA-201ENST00000254066 KLF18A0A0U1RQI7 1052 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 GOLGA8BA8MQT2 603 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 RFX5P48382 616 aaPredicted RBP23.12■■□□□ 1.29
RARA-201ENST00000254066 RGPD8O14715 1765 aaPredicted RBP23.12■■□□□ 1.29
RARA-201ENST00000254066 C21orf2O43822 256 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 ADAMTS2O95450 1211 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 MAP2K1Q02750 393 aaPredicted RBP23.12■■□□□ 1.29
RARA-201ENST00000254066 FILIP1LQ4L180 1135 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 TTC39AQ5SRH9 613 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 B4GALNT4Q76KP1 1039 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 TRAPPC11Q7Z392 1133 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 KLHDC4Q8TBB5 520 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 DBNDD2Q9BQY9 259 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 KAT14Q9H8E8 782 aa23.12■■□□□ 1.29
RARA-201ENST00000254066 GOLGA6CA6NDK9 693 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 CDKL5O76039 1030 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 CHGBP05060 677 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 GOLGA6DP0CG33 693 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 PTPN12Q05209 780 aaKnown RBP23.11■■□□□ 1.29
RARA-201ENST00000254066 PROSER3Q2NL68 480 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 AKAP4Q5JQC9 854 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 KRI1Q8N9T8 703 aaKnown RBP23.11■■□□□ 1.29
RARA-201ENST00000254066 CABS1Q96KC9 395 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 CDC5LQ99459 802 aaKnown RBP23.11■■□□□ 1.29
RARA-201ENST00000254066 DDX21Q9NR30 783 aaKnown RBP eCLIP23.11■■□□□ 1.29
RARA-201ENST00000254066 SAMSN1Q9NSI8 373 aaKnown RBP23.11■■□□□ 1.29
RARA-201ENST00000254066 GOLGA6AQ9NYA3 693 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 ADD3Q9UEY8 706 aaKnown RBP23.11■■□□□ 1.29
RARA-201ENST00000254066 C4AP0C0L4 1744 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 C4BP0C0L5 1744 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 SPEF2Q9C093 1822 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 IRF6O14896 467 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 EIF3HO15372 352 aaKnown RBP eCLIP23.11■■□□□ 1.29
RARA-201ENST00000254066 ARHGAP25P42331 645 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 NEXNQ0ZGT2 675 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 SPATA1Q5VX52 437 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 CHST3Q7LGC8 479 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 SPATA20Q8TB22 786 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 RUBCNQ92622 972 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 CAPS2Q9BXY5 557 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 PAG1Q9NWQ8 432 aa23.11■■□□□ 1.29
RARA-201ENST00000254066 TNS3Q68CZ2 1445 aa23.1■■□□□ 1.29
RARA-201ENST00000254066 GOLIM4O00461 696 aa23.1■■□□□ 1.29
RARA-201ENST00000254066 IGKV5-2P06315 115 aa23.1■■□□□ 1.29
RARA-201ENST00000254066 CKAP4Q07065 602 aaKnown RBP23.1■■□□□ 1.29
RARA-201ENST00000254066 GGCXP38435 758 aa23.1■■□□□ 1.29
RARA-201ENST00000254066 AKAP17AQ02040 695 aaKnown RBP23.1■■□□□ 1.29
RARA-201ENST00000254066 PLEKHO1Q53GL0 409 aaPredicted RBP23.1■■□□□ 1.29
RARA-201ENST00000254066 HSP90AA4PQ58FG1 418 aa23.1■■□□□ 1.29
RARA-201ENST00000254066 AMOTL1Q8IY63 956 aa23.1■■□□□ 1.29
RARA-201ENST00000254066 FNBP4Q8N3X1 1017 aaPredicted RBP23.1■■□□□ 1.29
RARA-201ENST00000254066 A0A0U1RQJ8 604 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 GOLGA8KD6RF30 607 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 PSMD14O00487 310 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 TRIM14Q14142 442 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 CYP26C1Q6V0L0 522 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 BCAS4Q8TDM0 211 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 ATRIPQ8WXE1 791 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 AGPSO00116 658 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 TEX33O43247 280 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 PRC1O43663 620 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 FSBPO95073 299 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 GCKRQ14397 625 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 MB21D2Q8IYB1 491 aaPredicted RBP23.09■■□□□ 1.29
RARA-201ENST00000254066 MED15Q96RN5 788 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 ALG1Q9BT22 464 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 NDUFB9Q9Y6M9 179 aa23.09■■□□□ 1.29
RARA-201ENST00000254066 NEURL1BA8MQ27 555 aa23.08■■□□□ 1.29
RARA-201ENST00000254066 RABL6Q3YEC7 729 aaPredicted RBP23.08■■□□□ 1.29
RARA-201ENST00000254066 XAGE2Q96GT9 111 aa23.08■■□□□ 1.29
RARA-201ENST00000254066 PSMD1Q99460 953 aa23.08■■□□□ 1.29
RARA-201ENST00000254066 QTRT2Q9H974 415 aaKnown RBP23.08■■□□□ 1.29
RARA-201ENST00000254066 MAST3O60307 1309 aa23.08■■□□□ 1.29
RARA-201ENST00000254066 MARF1Q9Y4F3 1742 aaKnown RBP23.08■■□□□ 1.29
RARA-201ENST00000254066 RNF113AO15541 343 aaKnown RBP23.08■■□□□ 1.28
RARA-201ENST00000254066 IMMTQ16891 758 aaKnown RBP23.08■■□□□ 1.28
RARA-201ENST00000254066 SLC9C2Q5TAH2 1124 aa23.08■■□□□ 1.28
RARA-201ENST00000254066 CDKAL1Q5VV42 579 aa23.08■■□□□ 1.28
RARA-201ENST00000254066 KRT40Q6A162 431 aa23.08■■□□□ 1.28
RARA-201ENST00000254066 UBE3BQ7Z3V4 1068 aa23.08■■□□□ 1.28
RARA-201ENST00000254066 ZNF579Q8NAF0 562 aaKnown RBP23.08■■□□□ 1.28
RARA-201ENST00000254066 SH3GL2Q99962 352 aa23.08■■□□□ 1.28
RARA-201ENST00000254066 FBXW10Q5XX13 1052 aa23.07■■□□□ 1.28
RARA-201ENST00000254066 NCAPH2Q6IBW4 605 aa23.07■■□□□ 1.28
RARA-201ENST00000254066 GPR108Q9NPR9 543 aa23.07■■□□□ 1.28
RARA-201ENST00000254066 GJB4Q9NTQ9 266 aa23.07■■□□□ 1.28
RARA-201ENST00000254066 ZMYM6O95789 1325 aa23.07■■□□□ 1.28
RARA-201ENST00000254066 CASP14P31944 242 aa23.07■■□□□ 1.28
RARA-201ENST00000254066 SKOR1P84550 965 aa23.07■■□□□ 1.28
RARA-201ENST00000254066 CCNI2Q6ZMN8 369 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms