RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 TROAPQ12815 778 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 SLC27A3Q5K4L6 730 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 ZNF804AQ7Z570 1209 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 CEP57L1Q8IYX8 460 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 TIGD1Q96MW7 591 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 RBM28Q9NW13 759 aaKnown RBP29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 CUTAO60888 179 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 DDAH1O94760 285 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 SERPINB2P05120 415 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 TOB1P50616 345 aaPredicted RBP29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 PIBF1Q8WXW3 757 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 MYH6P13533 1939 aa29.05■■■□□ 2.24
TMEM55B-201ENST00000250489 ST5P78524 1137 aa29.05■■■□□ 2.24
TMEM55B-201ENST00000250489 GPSM2P81274 684 aa29.05■■■□□ 2.24
TMEM55B-201ENST00000250489 RESP18Q5W5W9 173 aa29.05■■■□□ 2.24
TMEM55B-201ENST00000250489 SARM1Q6SZW1 724 aa29.05■■■□□ 2.24
TMEM55B-201ENST00000250489 DHX40Q8IX18 779 aaKnown RBP29.05■■■□□ 2.24
TMEM55B-201ENST00000250489 AKAP17AQ02040 695 aaKnown RBP29.04■■■□□ 2.24
TMEM55B-201ENST00000250489 GPR101Q96P66 508 aaPredicted RBP29.04■■■□□ 2.24
TMEM55B-201ENST00000250489 KCNF1Q9H3M0 494 aa29.04■■■□□ 2.24
TMEM55B-201ENST00000250489 PRPF3O43395 683 aaKnown RBP29.04■■■□□ 2.24
TMEM55B-201ENST00000250489 SYKP43405 635 aa29.04■■■□□ 2.24
TMEM55B-201ENST00000250489 PKN1Q16512 942 aa29.04■■■□□ 2.24
TMEM55B-201ENST00000250489 RILPL1Q5EBL4 403 aa29.04■■■□□ 2.24
TMEM55B-201ENST00000250489 CLIC6Q96NY7 704 aa29.04■■■□□ 2.24
TMEM55B-201ENST00000250489 QTRT2Q9H974 415 aaKnown RBP29.04■■■□□ 2.24
TMEM55B-201ENST00000250489 PLEKHA8P1O95397 391 aa29.03■■■□□ 2.24
TMEM55B-201ENST00000250489 PDE4BQ07343 736 aa29.03■■■□□ 2.24
TMEM55B-201ENST00000250489 NR5A1Q13285 461 aa29.03■■■□□ 2.24
TMEM55B-201ENST00000250489 SHISA4Q96DD7 197 aa29.03■■■□□ 2.24
TMEM55B-201ENST00000250489 NAT10Q9H0A0 1025 aaKnown RBP29.03■■■□□ 2.24
TMEM55B-201ENST00000250489 MCM9Q9NXL9 1143 aa29.03■■■□□ 2.24
TMEM55B-201ENST00000250489 MKRN1Q9UHC7 482 aaKnown RBP29.03■■■□□ 2.24
TMEM55B-201ENST00000250489 BECN2A8MW95 431 aa29.02■■■□□ 2.24
TMEM55B-201ENST00000250489 FAM47AQ5JRC9 791 aa29.02■■■□□ 2.24
TMEM55B-201ENST00000250489 NMT2O60551 498 aa29.02■■■□□ 2.24
TMEM55B-201ENST00000250489 GSTO1P78417 241 aa29.02■■■□□ 2.24
TMEM55B-201ENST00000250489 GRIK5Q16478 980 aa29.02■■■□□ 2.24
TMEM55B-201ENST00000250489 OXER1Q8TDS5 423 aa29.02■■■□□ 2.24
TMEM55B-201ENST00000250489 RBM17Q96I25 401 aaKnown RBP29.02■■■□□ 2.24
TMEM55B-201ENST00000250489 USP17L8P0C7I0 530 aa29.01■■■□□ 2.23
TMEM55B-201ENST00000250489 TMTC3Q6ZXV5 915 aa29.01■■■□□ 2.23
TMEM55B-201ENST00000250489 KRI1Q8N9T8 703 aaKnown RBP29.01■■■□□ 2.23
TMEM55B-201ENST00000250489 XBP1P17861 261 aa29.01■■■□□ 2.23
TMEM55B-201ENST00000250489 CDC25BP30305 580 aa29.01■■■□□ 2.23
TMEM55B-201ENST00000250489 RBM6P78332 1123 aaKnown RBP29.01■■■□□ 2.23
TMEM55B-201ENST00000250489 SH3RF3Q8TEJ3 882 aaPredicted RBP29.01■■■□□ 2.23
TMEM55B-201ENST00000250489 UFL1O94874 794 aa29■■■□□ 2.23
TMEM55B-201ENST00000250489 ATP2B4P23634 1241 aa29■■■□□ 2.23
TMEM55B-201ENST00000250489 ZRSR1Q15695 479 aaKnown RBP29■■■□□ 2.23
TMEM55B-201ENST00000250489 DPCR1Q3MIW9 517 aa29■■■□□ 2.23
TMEM55B-201ENST00000250489 C12orf60Q5U649 245 aa29■■■□□ 2.23
TMEM55B-201ENST00000250489 FBXW7Q969H0 707 aa29■■■□□ 2.23
TMEM55B-201ENST00000250489 PTGS1P23219 599 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 USP5P45974 858 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 PPP4CP60510 307 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 DIXDC1Q155Q3 683 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 AOPEPQ8N6M6 819 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 BPIFA3Q9BQP9 254 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 PHF20Q9BVI0 1012 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 VPS54Q9P1Q0 977 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 V9GY48 417 aaPredicted RBP28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 NLRP12P59046 1061 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 DDR1Q08345 913 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 DRC7Q8IY82 874 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 CD209Q9NNX6 404 aa28.99■■■□□ 2.23
TMEM55B-201ENST00000250489 TSPY2A6NKD2 308 aa28.98■■■□□ 2.23
TMEM55B-201ENST00000250489 NOLC1Q14978 699 aaKnown RBP eCLIP28.98■■■□□ 2.23
TMEM55B-201ENST00000250489 GGA1Q9UJY5 639 aa28.98■■■□□ 2.23
TMEM55B-201ENST00000250489 CNTNAP5Q8WYK1 1306 aa28.98■■■□□ 2.23
TMEM55B-201ENST00000250489 BAG3O95817 575 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 BRWD3Q6RI45 1802 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 KRT27Q7Z3Y8 459 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 CTCFLQ8NI51 663 aaPredicted RBP28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 MRFAP1L1Q96HT8 127 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 FBXO2Q9UK22 296 aaPredicted RBP28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 PCDHB6Q9Y5E3 794 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 ROBO3Q96MS0 1386 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 hCG_1642624A0A1W2PR95 340 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 TRIM37O94972 964 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 LDHCP07864 332 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 PTPREP23469 700 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 HOXA10P31260 410 aaPredicted RBP28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 NT5C2P49902 561 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 CCDC186Q7Z3E2 898 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 TUBE1Q9UJT0 475 aa28.97■■■□□ 2.23
TMEM55B-201ENST00000250489 BBOX1O75936 387 aa28.96■■■□□ 2.23
TMEM55B-201ENST00000250489 IL1R1P14778 569 aa28.96■■■□□ 2.23
TMEM55B-201ENST00000250489 RCSD1Q6JBY9 416 aa28.96■■■□□ 2.23
TMEM55B-201ENST00000250489 KIAA1524Q8TCG1 905 aa28.96■■■□□ 2.23
TMEM55B-201ENST00000250489 CABP5Q9NP86 173 aa28.96■■■□□ 2.23
TMEM55B-201ENST00000250489 SPTLC3Q9NUV7 552 aa28.96■■■□□ 2.23
TMEM55B-201ENST00000250489 CLIP2Q9UDT6 1046 aa28.96■■■□□ 2.23
TMEM55B-201ENST00000250489 KCNH3Q9ULD8 1083 aa28.96■■■□□ 2.23
TMEM55B-201ENST00000250489 PYCARDQ9ULZ3 195 aa28.96■■■□□ 2.23
TMEM55B-201ENST00000250489 POLRMTO00411 1230 aaKnown RBP28.95■■■□□ 2.23
TMEM55B-201ENST00000250489 BIN1O00499 593 aa28.95■■■□□ 2.23
TMEM55B-201ENST00000250489 KRT2P35908 639 aa28.95■■■□□ 2.23
TMEM55B-201ENST00000250489 SLC4A8Q2Y0W8 1093 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms