RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 LEMD3Q9Y2U8 911 aa25.01■■□□□ 1.59
CLN6-201ENST00000249806 HSPA1LP34931 641 aa25■■□□□ 1.59
CLN6-201ENST00000249806 GRIK5Q16478 980 aa25■■□□□ 1.59
CLN6-201ENST00000249806 AOPEPQ8N6M6 819 aa25■■□□□ 1.59
CLN6-201ENST00000249806 TPM3P06753 285 aa25■■□□□ 1.59
CLN6-201ENST00000249806 FUT2Q10981 343 aa25■■□□□ 1.59
CLN6-201ENST00000249806 PPP2R5BQ15173 497 aa25■■□□□ 1.59
CLN6-201ENST00000249806 PKN1Q16512 942 aa25■■□□□ 1.59
CLN6-201ENST00000249806 RESP18Q5W5W9 173 aa25■■□□□ 1.59
CLN6-201ENST00000249806 SPTY2D1Q68D10 685 aaPredicted RBP25■■□□□ 1.59
CLN6-201ENST00000249806 USP17L8P0C7I0 530 aa24.99■■□□□ 1.59
CLN6-201ENST00000249806 GYS1P13807 737 aa24.99■■□□□ 1.59
CLN6-201ENST00000249806 SPECC1Q5M775 1068 aa24.99■■□□□ 1.59
CLN6-201ENST00000249806 MCM9Q9NXL9 1143 aa24.99■■□□□ 1.59
CLN6-201ENST00000249806 VPS54Q9P1Q0 977 aa24.99■■□□□ 1.59
CLN6-201ENST00000249806 TRPC5Q9UL62 973 aaPredicted RBP24.99■■□□□ 1.59
CLN6-201ENST00000249806 V9GY48 417 aaPredicted RBP24.99■■□□□ 1.59
CLN6-201ENST00000249806 BAZ2BQ9UIF8 2168 aaKnown RBP24.99■■□□□ 1.59
CLN6-201ENST00000249806 XDHP47989 1333 aa24.98■■□□□ 1.59
CLN6-201ENST00000249806 ORC4O43929 436 aa24.98■■□□□ 1.59
CLN6-201ENST00000249806 LDHBP07195 334 aaKnown RBP24.98■■□□□ 1.59
CLN6-201ENST00000249806 AKAP17AQ02040 695 aaKnown RBP24.98■■□□□ 1.59
CLN6-201ENST00000249806 ZRSR1Q15695 479 aaKnown RBP24.98■■□□□ 1.59
CLN6-201ENST00000249806 NAT10Q9H0A0 1025 aaKnown RBP24.98■■□□□ 1.59
CLN6-201ENST00000249806 CLIP2Q9UDT6 1046 aa24.98■■□□□ 1.59
CLN6-201ENST00000249806 CUTAO60888 179 aa24.98■■□□□ 1.59
CLN6-201ENST00000249806 DIXDC1Q155Q3 683 aa24.98■■□□□ 1.59
CLN6-201ENST00000249806 ISM2Q6H9L7 571 aa24.98■■□□□ 1.59
CLN6-201ENST00000249806 SARM1Q6SZW1 724 aa24.98■■□□□ 1.59
CLN6-201ENST00000249806 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.98■■□□□ 1.59
CLN6-201ENST00000249806 KIAA1524Q8TCG1 905 aa24.98■■□□□ 1.59
CLN6-201ENST00000249806 RPGRQ92834 1020 aaKnown RBP24.98■■□□□ 1.59
CLN6-201ENST00000249806 ARPP21Q9UBL0 812 aaPredicted RBP24.98■■□□□ 1.59
CLN6-201ENST00000249806 PCDHB6Q9Y5E3 794 aa24.98■■□□□ 1.59
CLN6-201ENST00000249806 ADRA2BP18089 450 aa24.97■■□□□ 1.59
CLN6-201ENST00000249806 ATP2B1P20020 1258 aa24.97■■□□□ 1.59
CLN6-201ENST00000249806 GRIN1Q05586 938 aa24.97■■□□□ 1.59
CLN6-201ENST00000249806 WDR66Q8TBY9 1149 aa24.97■■□□□ 1.59
CLN6-201ENST00000249806 CABP5Q9NP86 173 aa24.97■■□□□ 1.59
CLN6-201ENST00000249806 GPSM2P81274 684 aa24.97■■□□□ 1.59
CLN6-201ENST00000249806 SBK1Q52WX2 424 aa24.97■■□□□ 1.59
CLN6-201ENST00000249806 RILPL1Q5EBL4 403 aa24.97■■□□□ 1.59
CLN6-201ENST00000249806 KRI1Q8N9T8 703 aaKnown RBP24.97■■□□□ 1.59
CLN6-201ENST00000249806 TIGD1Q96MW7 591 aa24.97■■□□□ 1.59
CLN6-201ENST00000249806 FAM237AA0A1B0GTK4 181 aa24.96■■□□□ 1.59
CLN6-201ENST00000249806 LRMPQ12912 555 aa24.96■■□□□ 1.59
CLN6-201ENST00000249806 MAST2Q6P0Q8 1798 aa24.96■■□□□ 1.59
CLN6-201ENST00000249806 PRPF3O43395 683 aaKnown RBP24.96■■□□□ 1.59
CLN6-201ENST00000249806 SERPINB2P05120 415 aa24.96■■□□□ 1.59
CLN6-201ENST00000249806 RBM6P78332 1123 aaKnown RBP24.96■■□□□ 1.59
CLN6-201ENST00000249806 SH3RF3Q8TEJ3 882 aaPredicted RBP24.96■■□□□ 1.59
CLN6-201ENST00000249806 DLEC1Q9Y238 1755 aa24.95■■□□□ 1.58
CLN6-201ENST00000249806 UBR3Q6ZT12 1888 aa24.95■■□□□ 1.58
CLN6-201ENST00000249806 CCDC144BQ3MJ40 725 aa24.95■■□□□ 1.58
CLN6-201ENST00000249806 LONRF3Q496Y0 759 aa24.95■■□□□ 1.58
CLN6-201ENST00000249806 DNTTIP2Q5QJE6 756 aaKnown RBP24.95■■□□□ 1.58
CLN6-201ENST00000249806 RBM28Q9NW13 759 aaKnown RBP24.95■■□□□ 1.58
CLN6-201ENST00000249806 KCNH3Q9ULD8 1083 aa24.95■■□□□ 1.58
CLN6-201ENST00000249806 LAMB1P07942 1786 aa24.95■■□□□ 1.58
CLN6-201ENST00000249806 KIAA1551Q9HCM1 1747 aa24.95■■□□□ 1.58
CLN6-201ENST00000249806 FAM205CA6NFA0 338 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 TSPY2A6NKD2 308 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 CALM1P0DP23 149 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 CALM2P0DP24 149 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 CALM3P0DP25 149 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 USP5P45974 858 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 NLRP12P59046 1061 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 PDE4BQ07343 736 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 ZNF804AQ7Z570 1209 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 SPTLC3Q9NUV7 552 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 MKRN1Q9UHC7 482 aaKnown RBP24.94■■□□□ 1.58
CLN6-201ENST00000249806 PNOCQ13519 176 aa24.94■■□□□ 1.58
CLN6-201ENST00000249806 QTRT2Q9H974 415 aaKnown RBP24.94■■□□□ 1.58
CLN6-201ENST00000249806 ZBTB22O15209 634 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 DDAH1O94760 285 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 CRY2Q49AN0 593 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 EARS2Q5JPH6 523 aaKnown RBP24.93■■□□□ 1.58
CLN6-201ENST00000249806 TMTC3Q6ZXV5 915 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 SRBD1Q8N5C6 995 aaKnown RBP24.93■■□□□ 1.58
CLN6-201ENST00000249806 CERKQ8TCT0 537 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 PHF20Q9BVI0 1012 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 FBXO2Q9UK22 296 aaPredicted RBP24.93■■□□□ 1.58
CLN6-201ENST00000249806 XBP1P17861 261 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 CDC25BP30305 580 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 TMED8Q6PL24 325 aaPredicted RBP24.93■■□□□ 1.58
CLN6-201ENST00000249806 DYNLL2Q96FJ2 89 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 MRFAP1L1Q96HT8 127 aa24.93■■□□□ 1.58
CLN6-201ENST00000249806 UFL1O94874 794 aa24.92■■□□□ 1.58
CLN6-201ENST00000249806 PTPREP23469 700 aa24.92■■□□□ 1.58
CLN6-201ENST00000249806 ST5P78524 1137 aa24.92■■□□□ 1.58
CLN6-201ENST00000249806 C12orf60Q5U649 245 aa24.92■■□□□ 1.58
CLN6-201ENST00000249806 TRIM37O94972 964 aa24.92■■□□□ 1.58
CLN6-201ENST00000249806 RCSD1Q6JBY9 416 aa24.92■■□□□ 1.58
CLN6-201ENST00000249806 METTL16Q86W50 562 aaKnown RBP24.92■■□□□ 1.58
CLN6-201ENST00000249806 TUBE1Q9UJT0 475 aa24.92■■□□□ 1.58
CLN6-201ENST00000249806 KRBA2Q6ZNG9 492 aa24.91■■□□□ 1.58
CLN6-201ENST00000249806 FOXP4Q8IVH2 680 aaPredicted RBP24.91■■□□□ 1.58
CLN6-201ENST00000249806 CTCFLQ8NI51 663 aaPredicted RBP24.91■■□□□ 1.58
CLN6-201ENST00000249806 BPIFA3Q9BQP9 254 aa24.91■■□□□ 1.58
CLN6-201ENST00000249806 CD209Q9NNX6 404 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms