RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 INTS4Q96HW7 963 aaKnown RBP15.22■□□□□ 0.03
LSM8-201ENST00000249299 UBAC1Q9BSL1 405 aa15.22■□□□□ 0.03
LSM8-201ENST00000249299 TOMM22Q9NS69 142 aa15.22■□□□□ 0.03
LSM8-201ENST00000249299 CNTNAP1P78357 1384 aa15.22■□□□□ 0.03
LSM8-201ENST00000249299 SHTN1A0MZ66 631 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 CLRN2A0PK11 232 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 TCP10L2B9ZVM9 353 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 CD2BP2O95400 341 aaKnown RBP15.21■□□□□ 0.03
LSM8-201ENST00000249299 RASA1P20936 1047 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 CACNB3P54284 484 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 TCP10Q12799 353 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 CUL4AQ13619 759 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 TOB2Q14106 344 aaPredicted RBP15.21■□□□□ 0.03
LSM8-201ENST00000249299 PPP2R5BQ15173 497 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 TATDN1Q6P1N9 297 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 Q6ZUG5 572 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 SH3BP5LQ7L8J4 393 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 PNMA8AQ86V59 439 aaPredicted RBP15.21■□□□□ 0.03
LSM8-201ENST00000249299 DGKHQ86XP1 1220 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 ZSCAN29Q8IWY8 852 aaPredicted RBP15.21■□□□□ 0.03
LSM8-201ENST00000249299 PLIN4Q96Q06 1357 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 CSRNP1Q96S65 589 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 VEZTQ9HBM0 779 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 PGAP2Q9UHJ9 254 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 TACC3Q9Y6A5 838 aa15.21■□□□□ 0.03
LSM8-201ENST00000249299 NAV1Q8NEY1 1877 aa15.21■□□□□ 0.02
LSM8-201ENST00000249299 DDTLA6NHG4 134 aaPredicted RBP15.2■□□□□ 0.02
LSM8-201ENST00000249299 TSPY2A6NKD2 308 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 SH2B2O14492 632 aaPredicted RBP15.2■□□□□ 0.02
LSM8-201ENST00000249299 IFIT3O14879 490 aaKnown RBP15.2■□□□□ 0.02
LSM8-201ENST00000249299 RANBP6O60518 1105 aaKnown RBP15.2■□□□□ 0.02
LSM8-201ENST00000249299 EGFRP00533 1210 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 CPA1P15085 419 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 NOVP48745 357 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 RASA3Q14644 834 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 RRP12Q5JTH9 1297 aaKnown RBP15.2■□□□□ 0.02
LSM8-201ENST00000249299 RBM26Q5T8P6 1007 aaKnown RBP15.2■□□□□ 0.02
LSM8-201ENST00000249299 CYB5R4Q7L1T6 521 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 ZFPM1Q8IX07 1006 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 CRACR2BQ8N4Y2 399 aaPredicted RBP15.2■□□□□ 0.02
LSM8-201ENST00000249299 NEDD1Q8NHV4 660 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 TMX3Q96JJ7 454 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 ZSCAN10Q96SZ4 725 aaPredicted RBP15.2■□□□□ 0.02
LSM8-201ENST00000249299 TRIM34Q9BYJ4 488 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 GINM1Q9NU53 330 aa15.2■□□□□ 0.02
LSM8-201ENST00000249299 TSPY3P0CV98 308 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 TSPY8P0CW00 308 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 TFAP4Q01664 338 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 TMEM67Q5HYA8 995 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 TRPM4Q8TD43 1214 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 BRF1Q92994 677 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 DYNLL2Q96FJ2 89 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 DEFB129Q9H1M3 183 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 INCENPQ9NQS7 918 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
LSM8-201ENST00000249299 ECM29Q5VYK3 1845 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 LAMB1P07942 1786 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 CDK5RAP2Q96SN8 1893 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 ADAMTSL1Q8N6G6 1762 aa15.19■□□□□ 0.02
LSM8-201ENST00000249299 DHX16O60231 1041 aaKnown RBP15.18■□□□□ 0.02
LSM8-201ENST00000249299 PDIA4P13667 645 aaKnown RBP15.18■□□□□ 0.02
LSM8-201ENST00000249299 SHMT1P34896 483 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 EPHX2P34913 555 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 HIRAP54198 1017 aaPredicted RBP15.18■□□□□ 0.02
LSM8-201ENST00000249299 WTAPQ15007 396 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 SEC23AQ15436 765 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 FAM212AQ96EL1 285 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 TEPSINQ96N21 525 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 LY9Q9HBG7 655 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 CWC22Q9HCG8 908 aaKnown RBP15.18■□□□□ 0.02
LSM8-201ENST00000249299 SYNPO2Q9UMS6 1093 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 UTRNP46939 3433 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 TNKSO95271 1327 aa15.18■□□□□ 0.02
LSM8-201ENST00000249299 BAZ2AQ9UIF9 1905 aaKnown RBP15.18■□□□□ 0.02
LSM8-201ENST00000249299 SMIM22K7EJ46 135 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 PRDM1O75626 825 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 COL9A3Q14050 684 aaPredicted RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 ANGEL2Q5VTE6 544 aaKnown RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 DCAF15Q66K64 600 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 SYNE3Q6ZMZ3 975 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 DCPSQ96C86 337 aaKnown RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 TAF1DQ9H5J8 278 aaPredicted RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 TPCN1Q9ULQ1 816 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 NID2Q14112 1375 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 IGKV6D-41A0A0C4DH26 115 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 CCDC69A6NI79 296 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 PFKFB2O60825 505 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 CALM1P0DP23 149 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 CALM2P0DP24 149 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 CALM3P0DP25 149 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 SUPT20HL1Q3ZLR7 823 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 CERKLQ49MI3 558 aaPredicted RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 IFIT1BQ5T764 474 aaKnown RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 ENAHQ8N8S7 591 aaPredicted RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 SLC44A5Q8NCS7 719 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 TCEANC2Q96MN5 208 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 LLPHQ9BRT6 129 aaKnown RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 TMEM39BQ9GZU3 492 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms