RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 MKNK2Q9HBH9 465 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 DDX4Q9NQI0 724 aaKnown RBP15.62■□□□□ 0.09
NUP85-201ENST00000245544 FOCADQ5VW36 1801 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 SYCE3A1L190 88 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 WDHD1O75717 1129 aaPredicted RBP15.62■□□□□ 0.09
NUP85-201ENST00000245544 ZNF445P59923 1031 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 KIAA2012Q0VF49 1180 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 CSPP1Q1MSJ5 1256 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 KRT40Q6A162 431 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 APOBEC3HQ6NTF7 200 aaKnown RBP15.62■□□□□ 0.09
NUP85-201ENST00000245544 CRACR2BQ8N4Y2 399 aaPredicted RBP15.62■□□□□ 0.09
NUP85-201ENST00000245544 TTLL6Q8N841 843 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 USP28Q96RU2 1077 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 SCAND2PQ9GZW5 306 aaPredicted RBP15.62■□□□□ 0.09
NUP85-201ENST00000245544 ATF5Q9Y2D1 282 aaPredicted RBP15.62■□□□□ 0.09
NUP85-201ENST00000245544 ELP1O95163 1332 aa15.62■□□□□ 0.09
NUP85-201ENST00000245544 BAZ2BQ9UIF8 2168 aaKnown RBP15.61■□□□□ 0.09
NUP85-201ENST00000245544 YDJCA8MPS7 323 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 XRCC6P12956 609 aaKnown RBP eCLIP15.61■□□□□ 0.09
NUP85-201ENST00000245544 RASA1P20936 1047 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 KIF23Q02241 960 aaPredicted RBP15.61■□□□□ 0.09
NUP85-201ENST00000245544 STRIP1Q5VSL9 837 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 CATIPQ7Z7H3 387 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 AMOTL1Q8IY63 956 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 PGBD1Q96JS3 809 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 PLEKHA8P1O95397 391 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 CDK8P49336 464 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 RCAN1P53805 252 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 CDC42EP5Q6NZY7 148 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 STK36Q9NRP7 1315 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 USP40Q9NVE5 1235 aa15.61■□□□□ 0.09
NUP85-201ENST00000245544 hCG_1642624A0A1W2PR95 340 aa15.6■□□□□ 0.09
NUP85-201ENST00000245544 PPIP5K2O43314 1243 aa15.6■□□□□ 0.09
NUP85-201ENST00000245544 HHIPL2Q6UWX4 724 aa15.6■□□□□ 0.09
NUP85-201ENST00000245544 C16orf86Q6ZW13 317 aa15.6■□□□□ 0.09
NUP85-201ENST00000245544 LIG1P18858 919 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 CRKP46108 304 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 FUT2Q10981 343 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 NFIAQ12857 509 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 TEKT1Q969V4 418 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 CCDC196A0A1B0GTZ2 297 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 TSPY3P0CV98 308 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 TSPY8P0CW00 308 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 CC2D2BQ6DHV5 1058 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 ZNF444Q8N0Y2 327 aaPredicted RBP15.59■□□□□ 0.09
NUP85-201ENST00000245544 SHISA4Q96DD7 197 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 PANK2Q9BZ23 570 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 GRPEL1Q9HAV7 217 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 CFAP45Q9UL16 551 aa15.59■□□□□ 0.09
NUP85-201ENST00000245544 MYH6P13533 1939 aa15.58■□□□□ 0.09
NUP85-201ENST00000245544 DDAH1O94760 285 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 SLURP2P0DP57 97 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 CACNB3P54284 484 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 ZFPM1Q8IX07 1006 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 RCOR1Q9UKL0 485 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 KCNJ14Q9UNX9 436 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 KIF13BQ9NQT8 1826 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 TRIM22Q8IYM9 498 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 ZNF277Q9NRM2 450 aaPredicted RBP15.58■□□□□ 0.08
NUP85-201ENST00000245544 CLIC4Q9Y696 253 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 SRCAPQ6ZRS2 3230 aa15.58■□□□□ 0.08
NUP85-201ENST00000245544 COL4A5P29400 1685 aa15.57■□□□□ 0.08
NUP85-201ENST00000245544 PKN1Q16512 942 aa15.57■□□□□ 0.08
NUP85-201ENST00000245544 CCDC93Q567U6 631 aa15.57■□□□□ 0.08
NUP85-201ENST00000245544 L1TD1Q5T7N2 865 aaKnown RBP15.57■□□□□ 0.08
NUP85-201ENST00000245544 MYSM1Q5VVJ2 828 aa15.57■□□□□ 0.08
NUP85-201ENST00000245544 CCDC125Q86Z20 511 aa15.57■□□□□ 0.08
NUP85-201ENST00000245544 SRBD1Q8N5C6 995 aaKnown RBP15.57■□□□□ 0.08
NUP85-201ENST00000245544 ZDHHC15Q96MV8 337 aa15.57■□□□□ 0.08
NUP85-201ENST00000245544 ZNF396Q96N95 335 aaPredicted RBP15.57■□□□□ 0.08
NUP85-201ENST00000245544 DEXIO95424 95 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 MRE11P49959 708 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 RBM5P52756 815 aaKnown RBP eCLIP15.56■□□□□ 0.084e-6■■■■■ 28.4
NUP85-201ENST00000245544 LRSAM1Q6UWE0 723 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 TMTC3Q6ZXV5 915 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 DGKHQ86XP1 1220 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 SUPT20HQ8NEM7 779 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 V9GY48 417 aaPredicted RBP15.56■□□□□ 0.08
NUP85-201ENST00000245544 CALM1P0DP23 149 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 CALM2P0DP24 149 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 CALM3P0DP25 149 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 FKBP1AP62942 108 aaKnown RBP15.56■□□□□ 0.08
NUP85-201ENST00000245544 GABPAQ06546 454 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 PPP2R5BQ15173 497 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 CCDC183Q5T5S1 534 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 RASGRP2Q7LDG7 609 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 BRAPQ7Z569 592 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 PNMA1Q8ND90 353 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 ANKS1AQ92625 1134 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 SYAP1Q96A49 352 aaPredicted RBP15.56■□□□□ 0.08
NUP85-201ENST00000245544 RNF26Q9BY78 433 aaPredicted RBP15.56■□□□□ 0.08
NUP85-201ENST00000245544 OSBPL5Q9H0X9 879 aaPredicted RBP15.56■□□□□ 0.08
NUP85-201ENST00000245544 KAT14Q9H8E8 782 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 TCP11L1Q9NUJ3 509 aa15.56■□□□□ 0.08
NUP85-201ENST00000245544 RBM28Q9NW13 759 aaKnown RBP15.56■□□□□ 0.08
NUP85-201ENST00000245544 GOLGA6L4A6NEF3 574 aa15.55■□□□□ 0.08
NUP85-201ENST00000245544 VEGFAP15692 232 aaPredicted RBP15.55■□□□□ 0.08
NUP85-201ENST00000245544 TRIM29Q14134 588 aa15.55■□□□□ 0.08
NUP85-201ENST00000245544 R3HDM1Q15032 1099 aaKnown RBP15.55■□□□□ 0.08
NUP85-201ENST00000245544 RTKN2Q8IZC4 609 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms