RNA–Protein interactions for RNA: ENST00000244458.6

PACSIN1-201, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-201ENST00000244458 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 TCP11L1Q9NUJ3 509 aa13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 WDHD1O75717 1129 aaPredicted RBP13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 TRIM47Q96LD4 638 aa13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 CSRNP2Q9H175 543 aa13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 USP17L3A6NCW0 530 aa13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 USP17L4A6NCW7 530 aa13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 EPS15P42566 896 aa13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 USP17L1Q7RTZ2 530 aa13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 EPSTI1Q96J88 318 aa13.44□□□□□ -0.26
PACSIN1-201ENST00000244458 UBE4AQ14139 1066 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 PTF1AQ7RTS3 328 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 CAGE1Q8TC20 777 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 BAZ2BQ9UIF8 2168 aaKnown RBP13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 FAM170AA1A519 330 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 NEMFO60524 1076 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 TRIM37O94972 964 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 KIF4BQ2VIQ3 1234 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 TDRD7Q8NHU6 1098 aaKnown RBP13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 KCNB2Q92953 911 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 POLR3EQ9NVU0 708 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 CTNND2Q9UQB3 1225 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 C3orf67Q6ZVT6 689 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 GGA1Q9UJY5 639 aa13.43□□□□□ -0.26
PACSIN1-201ENST00000244458 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 CCDC150Q8NCX0 1101 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 PNMA1Q8ND90 353 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 KIAA1524Q8TCG1 905 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 HPS5Q9UPZ3 1129 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 CDHR2Q9BYE9 1310 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 MTIF2P46199 727 aaKnown RBP13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 ASIC1P78348 528 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 PTGDRQ13258 359 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 LRRC8AQ8IWT6 810 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 DESI2Q9BSY9 194 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 DEF6Q9H4E7 631 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 FRMPD2Q68DX3 1309 aaPredicted RBP13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 ZNF76P36508 570 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 GSTO1P78417 241 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 INF2Q27J81 1249 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 KRBA2Q6ZNG9 492 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 MTERF4Q7Z6M4 381 aaKnown RBP13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 CCDC12Q8WUD4 166 aaPredicted RBP13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 FAM84BQ96KN1 310 aaPredicted RBP13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
PACSIN1-201ENST00000244458 CALM1P0DP23 149 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 CALM2P0DP24 149 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 CALM3P0DP25 149 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 NAA30Q147X3 362 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 LINC00116Q8NCU8 138 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 CTDP1Q9Y5B0 961 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 RAD51AP2Q09MP3 1159 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 KANK3Q6NY19 840 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 DTHD1Q6ZMT9 781 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 ARGLU1Q9NWB6 273 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 AKAP12Q02952 1782 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 FMNL1O95466 1100 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 IFNAR1P17181 557 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 TXKP42681 527 aa13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 FMR1NBQ8N0W7 255 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 ZNHIT6Q9NWK9 470 aaKnown RBP13.41□□□□□ -0.26
PACSIN1-201ENST00000244458 NFAT5O94916 1531 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 U2AF2P26368 475 aaKnown RBP eCLIP13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 CASQ1P31415 396 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 NOM1Q5C9Z4 860 aaKnown RBP13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 USP49Q70CQ1 688 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 IQUBQ8NA54 791 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 MYRIPQ8NFW9 859 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 TCEAL9Q9UHQ7 104 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 ARID4AP29374 1257 aaPredicted RBP13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 ENAHQ8N8S7 591 aaPredicted RBP13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 CCP110O43303 1012 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 CCNT1O60563 726 aaKnown RBP13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 MMP1P03956 469 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 KIAA1328Q86T90 577 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 WDR66Q8TBY9 1149 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 KCNF1Q9H3M0 494 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 A0A1W2PQ27 194 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 A0A1W2PQ64 194 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 A0A1W2PQD8 194 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 GRIN1Q05586 938 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 IGDCC4Q8TDY8 1250 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 PLA2G12BQ9BX93 195 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 TAB2Q9NYJ8 693 aa13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 BIN2Q9UBW5 565 aaPredicted RBP13.4□□□□□ -0.26
PACSIN1-201ENST00000244458 BTDP43251 543 aa13.39□□□□□ -0.27
PACSIN1-201ENST00000244458 RBM28Q9NW13 759 aaKnown RBP13.39□□□□□ -0.27
PACSIN1-201ENST00000244458 BSDC1Q9NW68 430 aaPredicted RBP13.39□□□□□ -0.27
PACSIN1-201ENST00000244458 POLR3GO15318 223 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms