RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 RCSD1Q6JBY9 416 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 CPLX2Q6PUV4 134 aaKnown RBP17.77■□□□□ 0.43
HDHD3-201ENST00000238379 TTC6Q86TZ1 520 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 FERMT3Q86UX7 667 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 NIM1KQ8IY84 436 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 FANCBQ8NB91 859 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.43
HDHD3-201ENST00000238379 IL17RBQ9NRM6 502 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 PRPF40AO75400 957 aaKnown RBP17.76■□□□□ 0.43
HDHD3-201ENST00000238379 GABPAQ06546 454 aa17.76■□□□□ 0.43
HDHD3-201ENST00000238379 RTN1Q16799 776 aa17.76■□□□□ 0.43
HDHD3-201ENST00000238379 ZNF444Q8N0Y2 327 aaPredicted RBP17.76■□□□□ 0.43
HDHD3-201ENST00000238379 BCS1LQ9Y276 419 aa17.76■□□□□ 0.43
HDHD3-201ENST00000238379 IFNAR1P17181 557 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 TROAPQ12815 778 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 PPP2R5BQ15173 497 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 SKOR2Q2VWA4 1001 aaPredicted RBP17.75■□□□□ 0.43
HDHD3-201ENST00000238379 CATIPQ7Z7H3 387 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 IDI2Q9BXS1 227 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 TCP11L1Q9NUJ3 509 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 ECM29Q5VYK3 1845 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 CCDC196A0A1B0GTZ2 297 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 RESTQ13127 1097 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 CFAP100Q494V2 611 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 DGKHQ86XP1 1220 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 NUP133Q8WUM0 1156 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 ANKS1AQ92625 1134 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 PHKBQ93100 1093 aa17.75■□□□□ 0.43
HDHD3-201ENST00000238379 NPM3O75607 178 aaKnown RBP17.74■□□□□ 0.43
HDHD3-201ENST00000238379 TSPY3P0CV98 308 aa17.74■□□□□ 0.43
HDHD3-201ENST00000238379 TSPY8P0CW00 308 aa17.74■□□□□ 0.43
HDHD3-201ENST00000238379 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
HDHD3-201ENST00000238379 NLGN2Q8NFZ4 835 aa17.74■□□□□ 0.43
HDHD3-201ENST00000238379 DDAH1O94760 285 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 CALM1P0DP23 149 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 CALM2P0DP24 149 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 CALM3P0DP25 149 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 FOSBP53539 338 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 CACNB3P54284 484 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 CXCL9Q07325 125 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 CCDC178Q5BJE1 867 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 ZFPM1Q8IX07 1006 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 RGS22Q8NE09 1264 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 PRMT6Q96LA8 375 aaPredicted RBP17.73■□□□□ 0.43
HDHD3-201ENST00000238379 FAM198AQ9UFP1 575 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 CNPY2Q9Y2B0 182 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
HDHD3-201ENST00000238379 STK36Q9NRP7 1315 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 LTBP3Q9NS15 1303 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 TCHHQ07283 1943 aa17.73■□□□□ 0.43
HDHD3-201ENST00000238379 FMNL1O95466 1100 aaPredicted RBP17.72■□□□□ 0.43
HDHD3-201ENST00000238379 FAM173BQ6P4H8 233 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 NBPF11Q86T75 865 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 TMEM87AQ8NBN3 555 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 FBXO18Q8NFZ0 1043 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 NEDD1Q8NHV4 660 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 C8orf76Q96K31 380 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 ZSCAN16Q9H4T2 348 aaPredicted RBP17.72■□□□□ 0.43
HDHD3-201ENST00000238379 TDRD3Q9H7E2 651 aaKnown RBP17.72■□□□□ 0.43
HDHD3-201ENST00000238379 GDPD2Q9HCC8 539 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 GUCY1B3Q02153 619 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 USP48Q86UV5 1035 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 CRACR2BQ8N4Y2 399 aaPredicted RBP17.72■□□□□ 0.43
HDHD3-201ENST00000238379 AGBL3Q8NEM8 1001 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 JDP2Q8WYK2 163 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 SPON1Q9HCB6 807 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 SERPINB13Q9UIV8 391 aa17.72■□□□□ 0.43
HDHD3-201ENST00000238379 SSRP1Q08945 709 aaKnown RBP17.71■□□□□ 0.43
HDHD3-201ENST00000238379 OTUD7BQ6GQQ9 843 aa17.71■□□□□ 0.43
HDHD3-201ENST00000238379 AIFM3Q96NN9 605 aa17.71■□□□□ 0.43
HDHD3-201ENST00000238379 ALG1Q9BT22 464 aa17.71■□□□□ 0.43
HDHD3-201ENST00000238379 EHD4Q9H223 541 aa17.71■□□□□ 0.43
HDHD3-201ENST00000238379 DHX36Q9H2U1 1008 aaKnown RBP17.71■□□□□ 0.43
HDHD3-201ENST00000238379 GJB4Q9NTQ9 266 aa17.71■□□□□ 0.43
HDHD3-201ENST00000238379 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 HLA-DOAP06340 250 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 FUT2Q10981 343 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 TCP10Q12799 353 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 KLHL40Q2TBA0 621 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 CMTR1Q8N1G2 835 aaKnown RBP17.7■□□□□ 0.42
HDHD3-201ENST00000238379 OGFOD1Q8N543 542 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 SLC26A6Q9BXS9 759 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 KAT14Q9H8E8 782 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 RBM28Q9NW13 759 aaKnown RBP17.7■□□□□ 0.42
HDHD3-201ENST00000238379 SWAP70Q9UH65 585 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 HDAC9Q9UKV0 1011 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
HDHD3-201ENST00000238379 UBE2Q2LH0YL09 131 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
HDHD3-201ENST00000238379 KCNA4P22459 653 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 CIAPIN1Q6FI81 312 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 SH3BP5LQ7L8J4 393 aa17.7■□□□□ 0.42
HDHD3-201ENST00000238379 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.7■□□□□ 0.42
HDHD3-201ENST00000238379 DDTLA6NHG4 134 aaPredicted RBP17.69■□□□□ 0.42
HDHD3-201ENST00000238379 SHMT1P34896 483 aa17.69■□□□□ 0.42
HDHD3-201ENST00000238379 NOVP48745 357 aa17.69■□□□□ 0.42
HDHD3-201ENST00000238379 PRELPP51888 382 aa17.69■□□□□ 0.42
HDHD3-201ENST00000238379 TRIM22Q8IYM9 498 aa17.69■□□□□ 0.42
HDHD3-201ENST00000238379 CCDC82Q8N4S0 544 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms