RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 WWC3Q9ULE0 1092 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 TACC3Q9Y6A5 838 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 ALS2Q96Q42 1657 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 ZNF569Q5MCW4 686 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 SPATA1Q5VX52 437 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 RASGRP2Q7LDG7 609 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 ZNF512BQ96KM6 892 aaPredicted RBP17.66■□□□□ 0.42
DDX55-201ENST00000238146 CSRNP2Q9H175 543 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 ADD3Q9UEY8 706 aaKnown RBP17.66■□□□□ 0.42
DDX55-201ENST00000238146 TCRBV5S4A2TA0A5A2 114 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
DDX55-201ENST00000238146 CTDSPL2Q05D32 466 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 LDHAL6AQ6ZMR3 332 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 CD44P16070 742 aaKnown RBP17.65■□□□□ 0.42
DDX55-201ENST00000238146 ATP2B1P20020 1258 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 STX17P56962 302 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 TRIM28Q13263 835 aaKnown RBP17.65■□□□□ 0.42
DDX55-201ENST00000238146 ALX1Q15699 326 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 HDXQ7Z353 690 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 DDX17Q92841 729 aaKnown RBP17.65■□□□□ 0.42
DDX55-201ENST00000238146 EPB41L4AQ9HCS5 686 aaPredicted RBP17.65■□□□□ 0.42
DDX55-201ENST00000238146 L1RE1Q9UN81 338 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 POTEB2H3BUK9 544 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 MFAP3LO75121 409 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 KIF4BQ2VIQ3 1234 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 KLHL10Q6JEL2 608 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 TRIM22Q8IYM9 498 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 SYNE4Q8N205 404 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 TRIM34Q9BYJ4 488 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 LCMT1Q9UIC8 334 aa17.65■□□□□ 0.42
DDX55-201ENST00000238146 TFRCP02786 760 aaKnown RBP17.64■□□□□ 0.41
DDX55-201ENST00000238146 CUL4BQ13620 913 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 OXER1Q8TDS5 423 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 ABCB6Q9NP58 842 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 VPS18Q9P253 973 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 TBC1D2BQ9UPU7 963 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 ZNF330Q9Y3S2 320 aaPredicted RBP17.64■□□□□ 0.41
DDX55-201ENST00000238146 KCPQ6ZWJ8 1503 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 A0A087X0B3 334 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 CASP14P31944 242 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 ACTN2P35609 894 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 CT47A1Q5JQC4 288 aaPredicted RBP17.64■□□□□ 0.41
DDX55-201ENST00000238146 CDKAL1Q5VV42 579 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 IFNL3Q8IZI9 196 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
DDX55-201ENST00000238146 ZBTB38Q8NAP3 1195 aaPredicted RBP17.64■□□□□ 0.41
DDX55-201ENST00000238146 TTLL11Q8NHH1 800 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 STRN4Q9NRL3 753 aa17.64■□□□□ 0.41
DDX55-201ENST00000238146 CWC15Q9P013 229 aaKnown RBP17.64■□□□□ 0.41
DDX55-201ENST00000238146 CTAGE9A4FU28 777 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 TUBB2AQ13885 445 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 RTN1Q16799 776 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 SLC35F6Q8N357 371 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 MSL3Q8N5Y2 521 aaKnown RBP17.63■□□□□ 0.41
DDX55-201ENST00000238146 TUBB2BQ9BVA1 445 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 SYNRGQ9UMZ2 1314 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 NID2Q14112 1375 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 ERVV-2B6SEH9 535 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 PATL2C9JE40 543 aaKnown RBP17.63■□□□□ 0.41
DDX55-201ENST00000238146 N4BP1O75113 896 aaKnown RBP17.63■□□□□ 0.41
DDX55-201ENST00000238146 ERLIN1O75477 346 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 ITGA6P23229 1130 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 CASP1P29466 404 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 AFMP43652 599 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 PHKA1P46020 1223 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 CRACR2BQ8N4Y2 399 aaPredicted RBP17.63■□□□□ 0.41
DDX55-201ENST00000238146 VGLL2Q8N8G2 317 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 IQUBQ8NA54 791 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 ZBTB9Q96C00 473 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 NAPBQ9H115 298 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 CABP5Q9NP86 173 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 CEP131Q9UPN4 1083 aa17.63■□□□□ 0.41
DDX55-201ENST00000238146 MYO5AQ9Y4I1 1855 aaKnown RBP17.63■□□□□ 0.41
DDX55-201ENST00000238146 LRP6O75581 1613 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 MYO1CO00159 1063 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 DEXIO95424 95 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 ABL1P00519 1130 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 GYPCP04921 128 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 FXR1P51114 621 aaKnown RBP eCLIP17.62■□□□□ 0.41
DDX55-201ENST00000238146 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
DDX55-201ENST00000238146 ZKSCAN3Q9BRR0 538 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 GREM2Q9H772 168 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 PARP4Q9UKK3 1724 aaKnown RBP17.62■□□□□ 0.41
DDX55-201ENST00000238146 WDR17Q8IZU2 1322 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 FECHP22830 423 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 TUBB4BP68371 445 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 AKNAD1Q5T1N1 836 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 ACRBPQ8NEB7 543 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 CTAGE1Q96RT6 745 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 CNNM1Q9NRU3 951 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
DDX55-201ENST00000238146 RHOXF2BP0C7M4 288 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 VSNL1P62760 191 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 WWC2Q6AWC2 1192 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 SH3RF1Q7Z6J0 888 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 PROSER2Q86WR7 435 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms