RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 SSRP1Q08945 709 aaKnown RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 ELOA2Q8IYF1 753 aaPredicted RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 KRI1Q8N9T8 703 aaKnown RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 LPIN2Q92539 896 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
CTSD-201ENST00000236671 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.84■□□□□ 0.45
CTSD-201ENST00000236671 CHD4Q14839 1912 aa17.84■□□□□ 0.45
CTSD-201ENST00000236671 PDE8AO60658 829 aa17.83■□□□□ 0.45
CTSD-201ENST00000236671 MBD4O95243 580 aa17.83■□□□□ 0.45
CTSD-201ENST00000236671 IFNAR1P17181 557 aa17.83■□□□□ 0.45
CTSD-201ENST00000236671 TOB1P50616 345 aaPredicted RBP17.83■□□□□ 0.45
CTSD-201ENST00000236671 EIF5P55010 431 aaKnown RBP17.83■□□□□ 0.45
CTSD-201ENST00000236671 PDE4BQ07343 736 aa17.83■□□□□ 0.45
CTSD-201ENST00000236671 NAPBQ9H115 298 aa17.83■□□□□ 0.45
CTSD-201ENST00000236671 INTS13Q9NVM9 706 aa17.83■□□□□ 0.45
CTSD-201ENST00000236671 FOXN1O15353 648 aa17.83■□□□□ 0.44
CTSD-201ENST00000236671 RPS6KA4O75676 772 aa17.83■□□□□ 0.44
CTSD-201ENST00000236671 H2AFXP16104 143 aaPredicted RBP17.83■□□□□ 0.44
CTSD-201ENST00000236671 GUCY1A2P33402 732 aa17.83■□□□□ 0.44
CTSD-201ENST00000236671 ERCC6LQ2NKX8 1250 aa17.83■□□□□ 0.44
CTSD-201ENST00000236671 TRIM65Q6PJ69 517 aa17.83■□□□□ 0.44
CTSD-201ENST00000236671 KRT222Q8N1A0 295 aa17.83■□□□□ 0.44
CTSD-201ENST00000236671 MAGEB6Q8N7X4 407 aa17.83■□□□□ 0.44
CTSD-201ENST00000236671 SPATA5Q8NB90 893 aa17.83■□□□□ 0.44
CTSD-201ENST00000236671 ZNF446Q9NWS9 450 aa17.83■□□□□ 0.44
CTSD-201ENST00000236671 IGSF3O75054 1194 aa17.82■□□□□ 0.44
CTSD-201ENST00000236671 MMP1P03956 469 aa17.82■□□□□ 0.44
CTSD-201ENST00000236671 HOMER1Q86YM7 354 aa17.82■□□□□ 0.44
CTSD-201ENST00000236671 HELBQ8NG08 1087 aaPredicted RBP17.82■□□□□ 0.44
CTSD-201ENST00000236671 ARMT1Q9H993 441 aa17.82■□□□□ 0.44
CTSD-201ENST00000236671 MROH5Q6ZUA9 1318 aa17.82■□□□□ 0.44
CTSD-201ENST00000236671 BTBD18B2RXH4 712 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 FANCGO15287 622 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 ZBTB7AO95365 584 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 TOP1P11387 765 aaKnown RBP17.81■□□□□ 0.44
CTSD-201ENST00000236671 GOLGA8FQ08AF8 430 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 GOLGA8DPQ0D2H9 430 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 RASGRF1Q13972 1273 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 SPECC1Q5M775 1068 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 AKNAD1Q5T1N1 836 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 RC3H1Q5TC82 1133 aaKnown RBP17.81■□□□□ 0.44
CTSD-201ENST00000236671 TMEM139Q8IV31 216 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 WASF1Q92558 559 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 CNNM2Q9H8M5 875 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 FBXO2Q9UK22 296 aaPredicted RBP17.81■□□□□ 0.44
CTSD-201ENST00000236671 GSG1L2A8MUP6 293 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 PTPN21Q16825 1174 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 FCHSD1Q86WN1 690 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 REXO1L1PQ8IX06 675 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 DIS3L2Q8IYB7 885 aaKnown RBP17.81■□□□□ 0.44
CTSD-201ENST00000236671 KRT23Q9C075 422 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 DNAI1Q9UI46 699 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 MAN1B1Q9UKM7 699 aa17.81■□□□□ 0.44
CTSD-201ENST00000236671 NUP98P52948 1817 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 NPHP1O15259 732 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 GRIN1Q05586 938 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 MAP3K12Q12852 859 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 TBX2Q13207 712 aaPredicted RBP17.8■□□□□ 0.44
CTSD-201ENST00000236671 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 NT5DC1Q5TFE4 455 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 KCNJ14Q9UNX9 436 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 PTPREP23469 700 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 IL6STP40189 918 aaPredicted RBP17.8■□□□□ 0.44
CTSD-201ENST00000236671 POSTNQ15063 836 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 STAG1Q8WVM7 1258 aa17.8■□□□□ 0.44
CTSD-201ENST00000236671 UTP14AQ9BVJ6 771 aaKnown RBP17.8■□□□□ 0.44
CTSD-201ENST00000236671 SAFBQ15424 915 aaKnown RBP eCLIP17.79■□□□□ 0.44
CTSD-201ENST00000236671 RTN1Q16799 776 aa17.79■□□□□ 0.44
CTSD-201ENST00000236671 MFSD6Q6ZSS7 791 aa17.79■□□□□ 0.44
CTSD-201ENST00000236671 DZIP3Q86Y13 1208 aaKnown RBP17.79■□□□□ 0.44
CTSD-201ENST00000236671 FOXP1Q9H334 677 aaPredicted RBP17.79■□□□□ 0.44
CTSD-201ENST00000236671 HOOK1Q9UJC3 728 aaKnown RBP17.79■□□□□ 0.44
CTSD-201ENST00000236671 CASZ1Q86V15 1759 aa17.79■□□□□ 0.44
CTSD-201ENST00000236671 PRKAB2O43741 272 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 SLFN14P0C7P3 912 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 PRR29P0C7W0 189 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 SLC5A1P13866 664 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 ZNF18P17022 549 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 RFC4P35249 363 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 FMR1Q06787 632 aaKnown RBP eCLIP17.78■□□□□ 0.44
CTSD-201ENST00000236671 RILPL1Q5EBL4 403 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 BCORQ6W2J9 1755 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 ARHGAP6O43182 974 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 SARSP49591 514 aaKnown RBP17.78■□□□□ 0.44
CTSD-201ENST00000236671 BICDL1Q6ZP65 573 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 TRIM22Q8IYM9 498 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 LCORLQ8N3X6 602 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 ZKSCAN3Q9BRR0 538 aa17.78■□□□□ 0.44
CTSD-201ENST00000236671 VWA3AA6NCI4 1184 aa17.77■□□□□ 0.44
CTSD-201ENST00000236671 ERVV-1B6SEH8 477 aa17.77■□□□□ 0.44
CTSD-201ENST00000236671 SNAP23O00161 211 aa17.77■□□□□ 0.44
CTSD-201ENST00000236671 POLR2DO15514 142 aaKnown RBP17.77■□□□□ 0.44
CTSD-201ENST00000236671 MORC3Q14149 939 aa17.77■□□□□ 0.44
CTSD-201ENST00000236671 WTAPQ15007 396 aa17.77■□□□□ 0.44
CTSD-201ENST00000236671 ZNF34Q8IZ26 560 aa17.77■□□□□ 0.44
CTSD-201ENST00000236671 SERTAD1Q9UHV2 236 aa17.77■□□□□ 0.44
CTSD-201ENST00000236671 ATF5Q9Y2D1 282 aaPredicted RBP17.77■□□□□ 0.44
CTSD-201ENST00000236671 ZSCAN12O43309 604 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 DEXIO95424 95 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms