RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 FBXO2Q9UK22 296 aaPredicted RBP10.5□□□□□ -0.73
SYDE2-201ENST00000234668 NFE2L3Q9Y4A8 694 aa10.5□□□□□ -0.73
SYDE2-201ENST00000234668 COL4A1P02462 1669 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 PRDX5P30044 214 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 FAM98CQ17RN3 349 aaKnown RBP10.49□□□□□ -0.73
SYDE2-201ENST00000234668 KIF18AQ8NI77 898 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 FAM84BQ96KN1 310 aaPredicted RBP10.49□□□□□ -0.73
SYDE2-201ENST00000234668 MED15Q96RN5 788 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 EPC1Q9H2F5 836 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 MINPP1Q9UNW1 487 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 NEMFO60524 1076 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 TOP1P11387 765 aaKnown RBP10.49□□□□□ -0.73
SYDE2-201ENST00000234668 GSDMDP57764 484 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 POSTNQ15063 836 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 ERCC6LQ2NKX8 1250 aa10.49□□□□□ -0.73
SYDE2-201ENST00000234668 IFIT1BQ5T764 474 aaKnown RBP10.49□□□□□ -0.73
SYDE2-201ENST00000234668 EP400Q96L91 3159 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 DEXIO95424 95 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 PTPREP23469 700 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 MDM2Q00987 491 aaPredicted RBP10.48□□□□□ -0.73
SYDE2-201ENST00000234668 TBC1D9BQ66K14 1250 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 ESR2Q92731 530 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.48□□□□□ -0.73
SYDE2-201ENST00000234668 PLEKHG2Q9H7P9 1386 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 TAF1P21675 1872 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 PKN1Q16512 942 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 LINC00116Q8NCU8 138 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 ZSCAN10Q96SZ4 725 aaPredicted RBP10.48□□□□□ -0.73
SYDE2-201ENST00000234668 RIOK1Q9BRS2 568 aaKnown RBP10.48□□□□□ -0.73
SYDE2-201ENST00000234668 DESI2Q9BSY9 194 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 BLZF1Q9H2G9 400 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 MAPK8IP1Q9UQF2 711 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 SRCAPQ6ZRS2 3230 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 ITGB4P16144 1822 aa10.48□□□□□ -0.73
SYDE2-201ENST00000234668 NUP98P52948 1817 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 SEC23AQ15436 765 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 SMARCE1Q969G3 411 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 TIGD1Q96MW7 591 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 BPIFA3Q9BQP9 254 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 PAPPAQ13219 1627 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 VWA3AA6NCI4 1184 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 FANCGO15287 622 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 TEX33O43247 280 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 KMT5BQ4FZB7 885 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 PARP10Q53GL7 1025 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 CAVIN4Q5BKX8 364 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 AMIGO3Q86WK7 504 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 RASGRP4Q8TDF6 673 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 CDC5LQ99459 802 aaKnown RBP10.47□□□□□ -0.73
SYDE2-201ENST00000234668 ATRNO75882 1429 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 MYH15Q9Y2K3 1946 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 A0A0U1RQJ8 604 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 IKBKBO14920 756 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 GNAT2P19087 354 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 MECOMQ03112 1051 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 MTF1Q14872 753 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 RILPL1Q5EBL4 403 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 ATRIPQ8WXE1 791 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 WASF1Q92558 559 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 PLIN2Q99541 437 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 IRX2Q9BZI1 471 aaPredicted RBP10.47□□□□□ -0.73
SYDE2-201ENST00000234668 IMPACTQ9P2X3 320 aa10.47□□□□□ -0.73
SYDE2-201ENST00000234668 SPEF2Q9C093 1822 aa10.46□□□□□ -0.73
SYDE2-201ENST00000234668 DISP2A7MBM2 1401 aa10.46□□□□□ -0.73
SYDE2-201ENST00000234668 URI1O94763 535 aaPredicted RBP10.46□□□□□ -0.73
SYDE2-201ENST00000234668 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.73
SYDE2-201ENST00000234668 CATIPQ7Z7H3 387 aa10.46□□□□□ -0.73
SYDE2-201ENST00000234668 SRBD1Q8N5C6 995 aaKnown RBP10.46□□□□□ -0.73
SYDE2-201ENST00000234668 CCDC150Q8NCX0 1101 aa10.46□□□□□ -0.73
SYDE2-201ENST00000234668 SYMPKQ92797 1274 aaKnown RBP10.46□□□□□ -0.73
SYDE2-201ENST00000234668 DYNLL2Q96FJ2 89 aa10.46□□□□□ -0.73
SYDE2-201ENST00000234668 EEF2KMTQ96G04 330 aa10.46□□□□□ -0.73
SYDE2-201ENST00000234668 CPVLQ9H3G5 476 aa10.46□□□□□ -0.73
SYDE2-201ENST00000234668 RNF41Q9H4P4 317 aaPredicted RBP10.46□□□□□ -0.73
SYDE2-201ENST00000234668 SPATA31A1Q5TZJ5 1347 aa10.46□□□□□ -0.73
SYDE2-201ENST00000234668 PNPLA7Q6ZV29 1317 aa10.46□□□□□ -0.73
SYDE2-201ENST00000234668 MYH7P12883 1935 aa10.46□□□□□ -0.74
SYDE2-201ENST00000234668 CCDC196A0A1B0GTZ2 297 aa10.46□□□□□ -0.74
SYDE2-201ENST00000234668 TRIM75PA6NK02 468 aa10.46□□□□□ -0.74
SYDE2-201ENST00000234668 USP17L8P0C7I0 530 aa10.46□□□□□ -0.74
SYDE2-201ENST00000234668 MCM7P33993 719 aa10.46□□□□□ -0.74
SYDE2-201ENST00000234668 KARSQ15046 597 aaKnown RBP10.46□□□□□ -0.74
SYDE2-201ENST00000234668 FBXO38Q6PIJ6 1188 aa10.46□□□□□ -0.74
SYDE2-201ENST00000234668 PIK3AP1Q6ZUJ8 805 aa10.46□□□□□ -0.74
SYDE2-201ENST00000234668 RASGRP2Q7LDG7 609 aa10.46□□□□□ -0.74
SYDE2-201ENST00000234668 GPKOWQ92917 476 aaPredicted RBP eCLIP10.46□□□□□ -0.74
SYDE2-201ENST00000234668 FOXP1Q9H334 677 aaPredicted RBP10.46□□□□□ -0.74
SYDE2-201ENST00000234668 ST7Q9NRC1 585 aa10.46□□□□□ -0.74
SYDE2-201ENST00000234668 GNL3LQ9NVN8 582 aaKnown RBP10.46□□□□□ -0.74
SYDE2-201ENST00000234668 LRP6O75581 1613 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 VSTM4Q8IW00 320 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 SRPRBQ9Y5M8 271 aaKnown RBP10.45□□□□□ -0.74
SYDE2-201ENST00000234668 COL1A1P02452 1464 aaPredicted RBP10.45□□□□□ -0.74
SYDE2-201ENST00000234668 C4AP0C0L4 1744 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 C4BP0C0L5 1744 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.45□□□□□ -0.74
SYDE2-201ENST00000234668 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
SYDE2-201ENST00000234668 ZSCAN20P17040 1043 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms