RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ZFPM1Q8IX07 1006 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 CRACR2BQ8N4Y2 399 aaPredicted RBP13.54□□□□□ -0.24
SF3B6-201ENST00000233468 CD99L2Q8TCZ2 262 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 RILPL2Q969X0 211 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 WRNIP1Q96S55 665 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 ELP3Q9H9T3 547 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 ZSWIM8A7E2V4 1837 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 DDTLA6NHG4 134 aaPredicted RBP13.53□□□□□ -0.24
SF3B6-201ENST00000233468 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
SF3B6-201ENST00000233468 MAP3K10Q02779 954 aa13.53□□□□□ -0.24
SF3B6-201ENST00000233468 PRPF38BQ5VTL8 546 aaKnown RBP13.53□□□□□ -0.24
SF3B6-201ENST00000233468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.53□□□□□ -0.24
SF3B6-201ENST00000233468 MS4A4AQ96JQ5 239 aa13.53□□□□□ -0.24
SF3B6-201ENST00000233468 ARMT1Q9H993 441 aa13.53□□□□□ -0.24
SF3B6-201ENST00000233468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.53□□□□□ -0.24
SF3B6-201ENST00000233468 MFAP1P55081 439 aaKnown RBP13.52□□□□□ -0.25
SF3B6-201ENST00000233468 GIMAP6Q6P9H5 292 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.52□□□□□ -0.25
SF3B6-201ENST00000233468 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 LCORLQ8N3X6 602 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 OPTNQ96CV9 577 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 NACAP1Q9BZK3 213 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 PUS7LQ9H0K6 701 aaKnown RBP13.52□□□□□ -0.25
SF3B6-201ENST00000233468 PICK1Q9NRD5 415 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 HELLSQ9NRZ9 838 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 MCM9Q9NXL9 1143 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 PPP4R2Q9NY27 417 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 ZNF112Q9UJU3 913 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 SLC4A4Q9Y6R1 1079 aa13.52□□□□□ -0.25
SF3B6-201ENST00000233468 CTNND1O60716 968 aaKnown RBP13.51□□□□□ -0.25
SF3B6-201ENST00000233468 ZMYM1Q5SVZ6 1142 aa13.51□□□□□ -0.25
SF3B6-201ENST00000233468 SLC39A7Q92504 469 aa13.51□□□□□ -0.25
SF3B6-201ENST00000233468 STRBPQ96SI9 672 aaKnown RBP13.51□□□□□ -0.25
SF3B6-201ENST00000233468 EHD4Q9H223 541 aa13.51□□□□□ -0.25
SF3B6-201ENST00000233468 GINM1Q9NU53 330 aa13.51□□□□□ -0.25
SF3B6-201ENST00000233468 SAP30BPQ9UHR5 308 aaKnown RBP13.51□□□□□ -0.25
SF3B6-201ENST00000233468 SERPINB13Q9UIV8 391 aa13.51□□□□□ -0.25
SF3B6-201ENST00000233468 PALD1Q9ULE6 856 aa13.51□□□□□ -0.25
SF3B6-201ENST00000233468 PTPN22Q9Y2R2 807 aa13.51□□□□□ -0.25
SF3B6-201ENST00000233468 MAST2Q6P0Q8 1798 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 RBBP6Q7Z6E9 1792 aaKnown RBP13.5□□□□□ -0.25
SF3B6-201ENST00000233468 TESPA1A2RU30 521 aaPredicted RBP13.5□□□□□ -0.25
SF3B6-201ENST00000233468 GPAA1O43292 621 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 APPP05067 770 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 VGLL4Q14135 290 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 NOL9Q5SY16 702 aaKnown RBP13.5□□□□□ -0.25
SF3B6-201ENST00000233468 TTC22Q5TAA0 569 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 ERO1BQ86YB8 467 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 BRI3BPQ8WY22 251 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 OSBP2Q969R2 916 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 DCP1AQ9NPI6 582 aaPredicted RBP13.5□□□□□ -0.25
SF3B6-201ENST00000233468 DIAPH3Q9NSV4 1193 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 AK9Q5TCS8 1911 aa13.5□□□□□ -0.25
SF3B6-201ENST00000233468 PATL2C9JE40 543 aaKnown RBP13.49□□□□□ -0.25
SF3B6-201ENST00000233468 PDE4AP27815 886 aa13.49□□□□□ -0.25
SF3B6-201ENST00000233468 PPATQ06203 517 aa13.49□□□□□ -0.25
SF3B6-201ENST00000233468 MCMDC2Q4G0Z9 681 aa13.49□□□□□ -0.25
SF3B6-201ENST00000233468 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
SF3B6-201ENST00000233468 METTL16Q86W50 562 aaKnown RBP13.49□□□□□ -0.25
SF3B6-201ENST00000233468 SCYL3Q8IZE3 742 aa13.49□□□□□ -0.25
SF3B6-201ENST00000233468 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
SF3B6-201ENST00000233468 ZKSCAN4Q969J2 545 aaPredicted RBP13.49□□□□□ -0.25
SF3B6-201ENST00000233468 ARPP21Q9UBL0 812 aaPredicted RBP13.49□□□□□ -0.25
SF3B6-201ENST00000233468 METRNQ9UJH8 293 aa13.49□□□□□ -0.25
SF3B6-201ENST00000233468 SPDYE5A6NIY4 337 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 PHF20L1A8MW92 1017 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 ECM2O94769 699 aaPredicted RBP13.48□□□□□ -0.25
SF3B6-201ENST00000233468 EN2P19622 333 aaPredicted RBP13.48□□□□□ -0.25
SF3B6-201ENST00000233468 SDSP20132 328 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 GTF2A2P52657 109 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 SP3Q02447 781 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 FAM43AQ8N2R8 423 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 ERO1AQ96HE7 468 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 EFCC1Q9HA90 598 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 ZNF287Q9HBT7 754 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 SWAP70Q9UH65 585 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 MYH2Q9UKX2 1941 aa13.48□□□□□ -0.25
SF3B6-201ENST00000233468 CCL15-CCL14A0A0B4J2E2 113 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 M0R2C6 588 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 PRKAB2O43741 272 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 SLC3A2P08195 630 aaKnown RBP13.47□□□□□ -0.25
SF3B6-201ENST00000233468 ASNSP08243 561 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 C7P10643 843 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 INPP5BP32019 993 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 TDO2P48775 406 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 PSEN1P49768 467 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 PPIL2Q13356 520 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 PDAP1Q13442 181 aaKnown RBP13.47□□□□□ -0.25
SF3B6-201ENST00000233468 CCL15Q16663 113 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 RUFY2Q8WXA3 655 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 AS3MTQ9HBK9 375 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 CABP5Q9NP86 173 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 SNCAIPQ9Y6H5 919 aa13.47□□□□□ -0.25
SF3B6-201ENST00000233468 USP17L12C9JPN9 530 aa13.46□□□□□ -0.25
SF3B6-201ENST00000233468 USP17L21D6R901 530 aa13.46□□□□□ -0.25
SF3B6-201ENST00000233468 CHGBP05060 677 aa13.46□□□□□ -0.25
SF3B6-201ENST00000233468 CETPP11597 493 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms