RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 NLRP7Q8WX94 980 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 TSGA10Q9BZW7 698 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 TNMDQ9H2S6 317 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 KIAA1468Q9P260 1216 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 TBX22Q9Y458 520 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 SPO11Q9Y5K1 396 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 RGPD1P0DJD0 1748 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 RASA4BC9J798 803 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 KCNA6P17658 529 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 CUL4AQ13619 759 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 KRT222Q8N1A0 295 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 RPGRQ92834 1020 aaKnown RBP9.46□□□□□ -0.89
SPARC-201ENST00000231061 CCDC68Q9H2F9 335 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 TOPAZ1Q8N9V7 1692 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 PI4KAP2A4QPH2 592 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 HSD17B7P56937 341 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 ESCO1Q5FWF5 840 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 SPECC1Q5M775 1068 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 NANOGNBQ7Z5D8 188 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 PROSER2Q86WR7 435 aaPredicted RBP9.46□□□□□ -0.9
SPARC-201ENST00000231061 PI4KAP1Q8N8J0 262 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 C7orf57Q8NEG2 295 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 SSH3Q8TE77 659 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 KCNN1Q92952 543 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 SH3KBP1Q96B97 665 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 KIF1BPQ96EK5 621 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 ZNF304Q9HCX3 659 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 ZNF652Q9Y2D9 606 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 ATP8A1Q9Y2Q0 1164 aa9.46□□□□□ -0.9
SPARC-201ENST00000231061 TMEM110-MUSTN1A8MSY1 372 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 NDUFB5O43674 189 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 CYP2C19P33261 490 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 GPSM2P81274 684 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 ITIH3Q06033 890 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 PDE4BQ07343 736 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 LEKR1Q6ZMV7 388 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 PEX5LQ8IYB4 626 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 LILRB2Q8N423 598 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 CDHR1Q96JP9 859 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 ABCG4Q9H172 646 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 TSPY26PQ9H489 355 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 LGR6Q9HBX8 967 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 SPG7Q9UQ90 795 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 LRRC10BA6NIK2 292 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 S100BP04271 92 aaPredicted RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 ZC3H6P61129 1189 aaKnown RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 SMARCC1Q92922 1105 aaPredicted RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 WDR33Q9C0J8 1336 aaKnown RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 LSM1O15116 133 aaKnown RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 KCNQ3O43525 872 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 PECAM1P16284 738 aaPredicted RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 KRT72Q14CN4 511 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 GNPTABQ3T906 1256 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 C10orf76Q5T2E6 689 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 ZNF530Q6P9A1 599 aaPredicted RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 MMS22LQ6ZRQ5 1243 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 THEMISQ8N1K5 641 aaPredicted RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 ZNF713Q8N859 430 aaPredicted RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 USP6NLQ92738 828 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 EZH1Q92800 747 aaPredicted RBP9.45□□□□□ -0.9
SPARC-201ENST00000231061 NALCNQ8IZF0 1738 aa9.45□□□□□ -0.9
SPARC-201ENST00000231061 DTNBO60941 627 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 GADD45BO75293 160 aaPredicted RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 OAS2P29728 719 aaKnown RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 GJC2Q5T442 439 aaPredicted RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 ANKRD18AQ8IVF6 992 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 B4GALNT2Q8NHY0 566 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 AK7Q96M32 723 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 HOXC10Q9NYD6 342 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 C9orf78Q9NZ63 289 aaPredicted RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 DIP2AQ14689 1571 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 AOX1Q06278 1338 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 GRM1Q13255 1194 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 CCBE1Q6UXH8 406 aaPredicted RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 MPRIPQ6WCQ1 1025 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 LSM14AQ8ND56 463 aaKnown RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 BTBD11A6QL63 1104 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 GOLGA6L19H0YKK7 550 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 KIAA0754O94854 1291 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 HSPA1AP0DMV8 641 aaKnown RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 HSPA1BP0DMV9 641 aaKnown RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 CPA1P15085 419 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 HSPA4P34932 840 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 LAMB3Q13751 1172 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 USP48Q86UV5 1035 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 C2orf49Q9BVC5 232 aaPredicted RBP9.44□□□□□ -0.9
SPARC-201ENST00000231061 DCAF16Q9NXF7 216 aa9.44□□□□□ -0.9
SPARC-201ENST00000231061 FMN2Q9NZ56 1722 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 SGSM2O43147 1006 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 FOXD2O60548 495 aaPredicted RBP9.43□□□□□ -0.9
SPARC-201ENST00000231061 EIF2B5Q13144 721 aaKnown RBP9.43□□□□□ -0.9
SPARC-201ENST00000231061 GBP6Q6ZN66 633 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 DDX54Q8TDD1 881 aaKnown RBP9.43□□□□□ -0.9
SPARC-201ENST00000231061 LRRC59Q96AG4 307 aaKnown RBP9.43□□□□□ -0.9
SPARC-201ENST00000231061 MAP3K14Q99558 947 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 SH3GL1Q99961 368 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms