RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 PTPAQ15257 358 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 C12orf60Q5U649 245 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 OLFM4Q6UX06 510 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 DIS3L2Q8IYB7 885 aaKnown RBP16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 TGFBRAP1Q8WUH2 860 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 RTFDC1Q9BY42 306 aaPredicted RBP16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 DNAJC25Q9H1X3 360 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 ANKRD31Q8N7Z5 1873 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 PLSCR1O15162 318 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 GSTO1P78417 241 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 DLEC1Q9Y238 1755 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 PPEF1O14829 653 aaPredicted RBP16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 SLC3A2P08195 630 aaKnown RBP16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 PPP4CP60510 307 aa16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 NOSTRINQ8IVI9 506 aa16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 PDE4BQ07343 736 aa16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 NR5A1Q13285 461 aa16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 PKN1Q16512 942 aa16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 OXER1Q8TDS5 423 aa16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 RNF26Q9BY78 433 aaPredicted RBP16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 NOL7Q9UMY1 257 aaKnown RBP16.68■□□□□ 0.26
PRKAB1-201ENST00000229328 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 CTAGE5O15320 804 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 BAG3O95817 575 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 MAPKAPK5Q8IW41 473 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 NLGN1Q8N2Q7 840 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 CCDC39Q9UFE4 941 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 LTBP1Q14766 1721 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 BTDP43251 543 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 TOB1P50616 345 aaPredicted RBP16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 PPP2R5BQ15173 497 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 MFSD14BQ5SR56 506 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 ZNF772Q68DY9 489 aaPredicted RBP16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 RCSD1Q6JBY9 416 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 SP8Q8IXZ3 490 aa16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 SAP30BPQ9UHR5 308 aaKnown RBP16.67■□□□□ 0.26
PRKAB1-201ENST00000229328 PLCD1P51178 756 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 VPS54Q9P1Q0 977 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 V9GY48 417 aaPredicted RBP16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 LRRC37AA6NMS7 1700 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 LDHCP07864 332 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 SRGNP10124 158 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 ZNF165P49910 485 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 TFAP4Q01664 338 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 SAFBQ15424 915 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 C11orf57Q6ZUT1 292 aaPredicted RBP16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 SLC44A5Q8NCS7 719 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 CLIC6Q96NY7 704 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 IL17RBQ9NRM6 502 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 IGSF3O75054 1194 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 DDAH1O94760 285 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 PTMAP06454 111 aaKnown RBP16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 PFKFB1P16118 471 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 CMA1P23946 247 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 NOL10Q9BSC4 688 aaKnown RBP16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 RBM28Q9NW13 759 aaKnown RBP16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 ATP6V0A2Q9Y487 856 aa16.66■□□□□ 0.26
PRKAB1-201ENST00000229328 PPP6R2O75170 966 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 CALM1P0DP23 149 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 CALM2P0DP24 149 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 CALM3P0DP25 149 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 MSL1Q68DK7 614 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 SHC4Q6S5L8 630 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 SDF4Q9BRK5 362 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 FOXP1Q9H334 677 aaPredicted RBP16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 GPR75-ASB3A0A0A6YYF3 556 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 PRPF3O43395 683 aaKnown RBP16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 ZNF202O95125 648 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 MMP10P09238 476 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 MSNP26038 577 aaKnown RBP16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 ZKSCAN5Q9Y2L8 839 aa16.65■□□□□ 0.26
PRKAB1-201ENST00000229328 MYH6P13533 1939 aa16.64■□□□□ 0.25
PRKAB1-201ENST00000229328 GTF2IP78347 998 aa16.64■□□□□ 0.25
PRKAB1-201ENST00000229328 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.25
PRKAB1-201ENST00000229328 NRXN2Q9P2S2 1712 aa16.64■□□□□ 0.25
PRKAB1-201ENST00000229328 USP17L3A6NCW0 530 aa16.64■□□□□ 0.25
PRKAB1-201ENST00000229328 USP17L4A6NCW7 530 aa16.64■□□□□ 0.25
PRKAB1-201ENST00000229328 USP17L1Q7RTZ2 530 aa16.64■□□□□ 0.25
PRKAB1-201ENST00000229328 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
PRKAB1-201ENST00000229328 CNTNAP5Q8WYK1 1306 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 NAV1Q8NEY1 1877 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 FAM205CA6NFA0 338 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 RHBDL3P58872 404 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 STX1AQ16623 288 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 TMC4Q7Z404 712 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 TEX11Q8IYF3 940 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 ZNF830Q96NB3 372 aaPredicted RBP16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 NPR1P16066 1061 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 IQCB1Q15051 598 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 EARS2Q5JPH6 523 aaKnown RBP16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 FBXW7Q969H0 707 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms