RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 HMGCS2P54868 508 aa21.83■■□□□ 1.09
PFN1-201ENST00000225655 LRRCC1Q9C099 1032 aa21.83■■□□□ 1.09
PFN1-201ENST00000225655 SAP30BPQ9UHR5 308 aaKnown RBP21.83■■□□□ 1.09
PFN1-201ENST00000225655 MYCP01106 439 aaPredicted RBP21.82■■□□□ 1.08
PFN1-201ENST00000225655 GRK4P32298 578 aa21.82■■□□□ 1.08
PFN1-201ENST00000225655 PRKCZQ05513 592 aa21.82■■□□□ 1.08
PFN1-201ENST00000225655 PABPC4Q13310 644 aaKnown RBP eCLIP21.82■■□□□ 1.085e-48■■■■□ 25.1
PFN1-201ENST00000225655 TTF1Q15361 905 aaPredicted RBP21.82■■□□□ 1.08
PFN1-201ENST00000225655 SLC34A2O95436 690 aa21.81■■□□□ 1.08
PFN1-201ENST00000225655 JAG1P78504 1218 aa21.81■■□□□ 1.08
PFN1-201ENST00000225655 ANKRD13CQ8N6S4 541 aa21.81■■□□□ 1.08
PFN1-201ENST00000225655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.81■■□□□ 1.08
PFN1-201ENST00000225655 BRCA2P51587 3418 aa21.8■■□□□ 1.08
PFN1-201ENST00000225655 IFIT2P09913 472 aaKnown RBP21.8■■□□□ 1.08
PFN1-201ENST00000225655 USP5P45974 858 aa21.8■■□□□ 1.08
PFN1-201ENST00000225655 GCLCP48506 637 aaPredicted RBP21.8■■□□□ 1.08
PFN1-201ENST00000225655 BACE1P56817 501 aa21.8■■□□□ 1.08
PFN1-201ENST00000225655 FAM110CQ1W6H9 321 aa21.8■■□□□ 1.08
PFN1-201ENST00000225655 GABRQQ9UN88 632 aa21.8■■□□□ 1.08
PFN1-201ENST00000225655 MTMR2Q13614 643 aa21.79■■□□□ 1.08
PFN1-201ENST00000225655 SLAIN1Q8ND83 568 aa21.79■■□□□ 1.08
PFN1-201ENST00000225655 ASCC2Q9H1I8 757 aaPredicted RBP21.79■■□□□ 1.08
PFN1-201ENST00000225655 EHD4Q9H223 541 aa21.79■■□□□ 1.08
PFN1-201ENST00000225655 ZBTB21Q9ULJ3 1066 aa21.79■■□□□ 1.08
PFN1-201ENST00000225655 DDX60LQ5H9U9 1706 aaKnown RBP21.78■■□□□ 1.08
PFN1-201ENST00000225655 C19orf81C9J6K1 198 aa21.78■■□□□ 1.08
PFN1-201ENST00000225655 TNPO2O14787 897 aaKnown RBP21.78■■□□□ 1.08
PFN1-201ENST00000225655 GDF11O95390 407 aa21.78■■□□□ 1.08
PFN1-201ENST00000225655 MTFR1Q15390 333 aa21.78■■□□□ 1.08
PFN1-201ENST00000225655 RIOK1Q9BRS2 568 aaKnown RBP21.78■■□□□ 1.08
PFN1-201ENST00000225655 MAGEB6P1A0A0J9YX57 407 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 USP17L10C9JJH3 530 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 PDE6AP16499 860 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 FLT3LGP49771 235 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 IRF5Q13568 498 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 SHROOM1Q2M3G4 852 aaPredicted RBP21.77■■□□□ 1.08
PFN1-201ENST00000225655 SLC9C2Q5TAH2 1124 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 TATDN1Q6P1N9 297 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 TTC6Q86TZ1 520 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 TMOD4Q9NZQ9 345 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 SERPINB13Q9UIV8 391 aa21.77■■□□□ 1.08
PFN1-201ENST00000225655 MKI67P46013 3256 aaKnown RBP21.76■■□□□ 1.07
PFN1-201ENST00000225655 GOLIM4O00461 696 aa21.76■■□□□ 1.07
PFN1-201ENST00000225655 HOXA7P31268 230 aaPredicted RBP21.76■■□□□ 1.07
PFN1-201ENST00000225655 UBXN2AP68543 259 aa21.76■■□□□ 1.07
PFN1-201ENST00000225655 DOCK3Q8IZD9 2030 aa21.76■■□□□ 1.07
PFN1-201ENST00000225655 PXYLP1Q8TE99 480 aa21.76■■□□□ 1.07
PFN1-201ENST00000225655 COA7Q96BR5 231 aa21.76■■□□□ 1.07
PFN1-201ENST00000225655 BCL11AQ9H165 835 aa21.76■■□□□ 1.07
PFN1-201ENST00000225655 BIN2Q9UBW5 565 aaPredicted RBP21.76■■□□□ 1.07
PFN1-201ENST00000225655 NAV1Q8NEY1 1877 aa21.75■■□□□ 1.07
PFN1-201ENST00000225655 ADCY3O60266 1144 aa21.75■■□□□ 1.07
PFN1-201ENST00000225655 CCL5P13501 91 aa21.75■■□□□ 1.07
PFN1-201ENST00000225655 NKX2-3Q8TAU0 364 aa21.75■■□□□ 1.07
PFN1-201ENST00000225655 CCDC136Q96JN2 1154 aa21.75■■□□□ 1.07
PFN1-201ENST00000225655 DNAJC2Q99543 621 aaKnown RBP21.75■■□□□ 1.07
PFN1-201ENST00000225655 GH2P01242 217 aa21.74■■□□□ 1.07
PFN1-201ENST00000225655 GJB1P08034 283 aa21.74■■□□□ 1.07
PFN1-201ENST00000225655 ATP5JP18859 108 aa21.74■■□□□ 1.07
PFN1-201ENST00000225655 IRX3P78415 501 aaPredicted RBP21.74■■□□□ 1.07
PFN1-201ENST00000225655 ANKRD45Q5TZF3 282 aa21.74■■□□□ 1.07
PFN1-201ENST00000225655 SHISA4Q96DD7 197 aa21.74■■□□□ 1.07
PFN1-201ENST00000225655 GPATCH3Q96I76 525 aa21.74■■□□□ 1.07
PFN1-201ENST00000225655 MORF4L1Q9UBU8 362 aa21.74■■□□□ 1.07
PFN1-201ENST00000225655 ZNF532Q9HCE3 1301 aa21.74■■□□□ 1.07
PFN1-201ENST00000225655 TCRBV5S4A2TA0A5A2 114 aa21.73■■□□□ 1.07
PFN1-201ENST00000225655 IGHDP01880 384 aa21.73■■□□□ 1.07
PFN1-201ENST00000225655 GJA8P48165 433 aa21.73■■□□□ 1.07
PFN1-201ENST00000225655 SMC5Q8IY18 1101 aa21.73■■□□□ 1.07
PFN1-201ENST00000225655 CRNKL1Q9BZJ0 848 aaKnown RBP21.73■■□□□ 1.07
PFN1-201ENST00000225655 RNF208Q9H0X6 261 aa21.73■■□□□ 1.07
PFN1-201ENST00000225655 ELNP15502 786 aa21.72■■□□□ 1.07
PFN1-201ENST00000225655 PLCD1P51178 756 aa21.72■■□□□ 1.07
PFN1-201ENST00000225655 CERKLQ49MI3 558 aaPredicted RBP21.72■■□□□ 1.07
PFN1-201ENST00000225655 EDC3Q96F86 508 aaKnown RBP21.72■■□□□ 1.07
PFN1-201ENST00000225655 EMILIN3Q9NT22 766 aa21.72■■□□□ 1.07
PFN1-201ENST00000225655 PAG1Q9NWQ8 432 aa21.72■■□□□ 1.07
PFN1-201ENST00000225655 POLR3DP05423 398 aaPredicted RBP21.71■■□□□ 1.07
PFN1-201ENST00000225655 SHMT1P34896 483 aa21.71■■□□□ 1.07
PFN1-201ENST00000225655 USP17L2Q6R6M4 530 aa21.71■■□□□ 1.07
PFN1-201ENST00000225655 P2RX7Q99572 595 aaKnown RBP21.71■■□□□ 1.07
PFN1-201ENST00000225655 HAUS7Q99871 368 aa21.71■■□□□ 1.07
PFN1-201ENST00000225655 BOLA2Q9H3K6 86 aa21.71■■□□□ 1.07
PFN1-201ENST00000225655 SMARCA5O60264 1052 aaPredicted RBP21.7■■□□□ 1.06
PFN1-201ENST00000225655 INHAP05111 366 aa21.7■■□□□ 1.06
PFN1-201ENST00000225655 HERVK_113P62684 666 aa21.7■■□□□ 1.06
PFN1-201ENST00000225655 GABPAQ06546 454 aa21.7■■□□□ 1.06
PFN1-201ENST00000225655 ABCB5Q2M3G0 1257 aa21.7■■□□□ 1.06
PFN1-201ENST00000225655 CENPQQ7L2Z9 268 aaPredicted RBP21.7■■□□□ 1.06
PFN1-201ENST00000225655 C12orf42Q96LP6 360 aa21.7■■□□□ 1.06
PFN1-201ENST00000225655 UNC93B1Q9H1C4 597 aa21.7■■□□□ 1.06
PFN1-201ENST00000225655 MCM9Q9NXL9 1143 aa21.7■■□□□ 1.06
PFN1-201ENST00000225655 PPP4R2Q9NY27 417 aa21.7■■□□□ 1.06
PFN1-201ENST00000225655 MYH7P12883 1935 aa21.7■■□□□ 1.06
PFN1-201ENST00000225655 ADD2P35612 726 aa21.69■■□□□ 1.06
PFN1-201ENST00000225655 RAB3GAP1Q15042 981 aa21.69■■□□□ 1.06
PFN1-201ENST00000225655 B4GALNT3Q6L9W6 998 aa21.69■■□□□ 1.06
PFN1-201ENST00000225655 LCORLQ8N3X6 602 aa21.69■■□□□ 1.06
PFN1-201ENST00000225655 GTF3C2Q8WUA4 911 aaPredicted RBP21.69■■□□□ 1.06
PFN1-201ENST00000225655 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms