RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 NCOA5Q9HCD5 579 aaKnown RBP21.16■□□□□ 0.98
CBX1-201ENST00000225603 SCAF8Q9UPN6 1271 aaKnown RBP21.16■□□□□ 0.98
CBX1-201ENST00000225603 CNTNAP1P78357 1384 aa21.16■□□□□ 0.98
CBX1-201ENST00000225603 ASTN2O75129 1339 aaPredicted RBP21.16■□□□□ 0.98
CBX1-201ENST00000225603 TSPY2A6NKD2 308 aa21.16■□□□□ 0.98
CBX1-201ENST00000225603 DDNO94850 711 aaPredicted RBP21.16■□□□□ 0.98
CBX1-201ENST00000225603 LIFRP42702 1097 aa21.16■□□□□ 0.98
CBX1-201ENST00000225603 GZF1Q9H116 711 aaPredicted RBP21.16■□□□□ 0.98
CBX1-201ENST00000225603 TMOD2Q9NZR1 351 aa21.16■□□□□ 0.98
CBX1-201ENST00000225603 SERPINB13Q9UIV8 391 aa21.16■□□□□ 0.98
CBX1-201ENST00000225603 WTAPQ15007 396 aa21.15■□□□□ 0.98
CBX1-201ENST00000225603 SGMS1Q86VZ5 419 aa21.15■□□□□ 0.98
CBX1-201ENST00000225603 MTA3Q9BTC8 594 aa21.15■□□□□ 0.98
CBX1-201ENST00000225603 DNAJC18Q9H819 358 aa21.15■□□□□ 0.98
CBX1-201ENST00000225603 IL17RBQ9NRM6 502 aa21.15■□□□□ 0.98
CBX1-201ENST00000225603 FAM196BA6NMK8 535 aa21.14■□□□□ 0.98
CBX1-201ENST00000225603 HLA-DOAP06340 250 aa21.14■□□□□ 0.98
CBX1-201ENST00000225603 MMP14P50281 582 aa21.14■□□□□ 0.98
CBX1-201ENST00000225603 SART3Q15020 963 aaKnown RBP21.14■□□□□ 0.98
CBX1-201ENST00000225603 ZNF444Q8N0Y2 327 aaPredicted RBP21.14■□□□□ 0.98
CBX1-201ENST00000225603 MYL10Q9BUA6 226 aa21.14■□□□□ 0.98
CBX1-201ENST00000225603 DHX36Q9H2U1 1008 aaKnown RBP21.14■□□□□ 0.98
CBX1-201ENST00000225603 GPRC5DQ9NZD1 345 aa21.14■□□□□ 0.98
CBX1-201ENST00000225603 GOLGA8BA8MQT2 603 aa21.14■□□□□ 0.97
CBX1-201ENST00000225603 RXRAP19793 462 aa21.14■□□□□ 0.97
CBX1-201ENST00000225603 APOA5Q6Q788 366 aa21.14■□□□□ 0.97
CBX1-201ENST00000225603 NFXL1Q6ZNB6 911 aa21.14■□□□□ 0.97
CBX1-201ENST00000225603 IQCA1Q86XH1 822 aa21.14■□□□□ 0.97
CBX1-201ENST00000225603 SIPA1L1O43166 1804 aa21.14■□□□□ 0.97
CBX1-201ENST00000225603 MYO1BO43795 1136 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 SHMT1P34896 483 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 EPS15P42566 896 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 CDAN1Q8IWY9 1227 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 PI4KBQ9UBF8 816 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 ATRNL1Q5VV63 1379 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 ERICH2A1L162 156 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 KIF4BQ2VIQ3 1234 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 L1TD1Q5T7N2 865 aaKnown RBP21.13■□□□□ 0.97
CBX1-201ENST00000225603 TRPM4Q8TD43 1214 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 EHD4Q9H223 541 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 ZNF287Q9HBT7 754 aa21.13■□□□□ 0.97
CBX1-201ENST00000225603 H7C1D1 291 aa21.12■□□□□ 0.97
CBX1-201ENST00000225603 BAG4O95429 457 aaKnown RBP21.12■□□□□ 0.97
CBX1-201ENST00000225603 TSPY3P0CV98 308 aa21.12■□□□□ 0.97
CBX1-201ENST00000225603 TSPY8P0CW00 308 aa21.12■□□□□ 0.97
CBX1-201ENST00000225603 FKBP1CQ5VVH2 108 aa21.12■□□□□ 0.97
CBX1-201ENST00000225603 FAM151AQ8WW52 585 aa21.12■□□□□ 0.97
CBX1-201ENST00000225603 TMEM39BQ9GZU3 492 aa21.12■□□□□ 0.97
CBX1-201ENST00000225603 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.12■□□□□ 0.97
CBX1-201ENST00000225603 CCDC69A6NI79 296 aa21.12■□□□□ 0.97
CBX1-201ENST00000225603 SKOR2Q2VWA4 1001 aaPredicted RBP21.12■□□□□ 0.97
CBX1-201ENST00000225603 RCSD1Q6JBY9 416 aa21.12■□□□□ 0.97
CBX1-201ENST00000225603 FSD2A1L4K1 749 aa21.11■□□□□ 0.97
CBX1-201ENST00000225603 JAK2O60674 1132 aa21.11■□□□□ 0.97
CBX1-201ENST00000225603 CTDNEP1O95476 244 aa21.11■□□□□ 0.97
CBX1-201ENST00000225603 PKP1Q13835 747 aa21.11■□□□□ 0.97
CBX1-201ENST00000225603 MICU3Q86XE3 530 aa21.11■□□□□ 0.97
CBX1-201ENST00000225603 CCDC144CPQ8IYA2 1237 aa21.11■□□□□ 0.97
CBX1-201ENST00000225603 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.11■□□□□ 0.97
CBX1-201ENST00000225603 SWAP70Q9UH65 585 aa21.11■□□□□ 0.97
CBX1-201ENST00000225603 SMC3Q9UQE7 1217 aa21.11■□□□□ 0.97
CBX1-201ENST00000225603 SLC12A7Q9Y666 1083 aa21.11■□□□□ 0.97
CBX1-201ENST00000225603 GOLGA6L22H0YM25 854 aa21.1■□□□□ 0.97
CBX1-201ENST00000225603 PPFIA3O75145 1194 aa21.1■□□□□ 0.97
CBX1-201ENST00000225603 AKR1B1P15121 316 aa21.1■□□□□ 0.97
CBX1-201ENST00000225603 IFIT1BQ5T764 474 aaKnown RBP21.1■□□□□ 0.97
CBX1-201ENST00000225603 CSRNP1Q96S65 589 aa21.1■□□□□ 0.97
CBX1-201ENST00000225603 COL2A1P02458 1487 aaPredicted RBP21.1■□□□□ 0.97
CBX1-201ENST00000225603 GRIN3BO60391 1043 aa21.1■□□□□ 0.97
CBX1-201ENST00000225603 GJB2P29033 226 aa21.1■□□□□ 0.97
CBX1-201ENST00000225603 TMTC2Q8N394 836 aa21.1■□□□□ 0.97
CBX1-201ENST00000225603 CRACR2BQ8N4Y2 399 aaPredicted RBP21.1■□□□□ 0.97
CBX1-201ENST00000225603 NEDD1Q8NHV4 660 aa21.1■□□□□ 0.97
CBX1-201ENST00000225603 PGAP2Q9UHJ9 254 aa21.1■□□□□ 0.97
CBX1-201ENST00000225603 GOLGA6L3A6NEY3 463 aa21.09■□□□□ 0.97
CBX1-201ENST00000225603 ZBTB43O43298 467 aa21.09■□□□□ 0.97
CBX1-201ENST00000225603 HIRAP54198 1017 aaPredicted RBP21.09■□□□□ 0.97
CBX1-201ENST00000225603 FAM83AQ86UY5 434 aa21.09■□□□□ 0.97
CBX1-201ENST00000225603 METTL16Q86W50 562 aaKnown RBP21.09■□□□□ 0.97
CBX1-201ENST00000225603 FOXP4Q8IVH2 680 aaPredicted RBP21.09■□□□□ 0.97
CBX1-201ENST00000225603 FAM217BQ9NTX9 383 aaPredicted RBP21.09■□□□□ 0.97
CBX1-201ENST00000225603 TCP11L1Q9NUJ3 509 aa21.09■□□□□ 0.97
CBX1-201ENST00000225603 CDC27P30260 824 aa21.09■□□□□ 0.97
CBX1-201ENST00000225603 SHROOM1Q2M3G4 852 aaPredicted RBP21.09■□□□□ 0.97
CBX1-201ENST00000225603 ZNF654Q8IZM8 581 aa21.09■□□□□ 0.97
CBX1-201ENST00000225603 NSUN7Q8NE18 718 aaKnown RBP21.09■□□□□ 0.97
CBX1-201ENST00000225603 HACL1Q9UJ83 578 aa21.09■□□□□ 0.97
CBX1-201ENST00000225603 ADD1P35611 737 aaKnown RBP21.08■□□□□ 0.97
CBX1-201ENST00000225603 NT5C2P49902 561 aa21.08■□□□□ 0.97
CBX1-201ENST00000225603 METAP2P50579 478 aaKnown RBP eCLIP21.08■□□□□ 0.97
CBX1-201ENST00000225603 RASA3Q14644 834 aa21.08■□□□□ 0.96
CBX1-201ENST00000225603 DDX11Q96FC9 970 aa21.07■□□□□ 0.96
CBX1-201ENST00000225603 CEP95Q96GE4 821 aa21.07■□□□□ 0.96
CBX1-201ENST00000225603 GOLGA8AA7E2F4 631 aa21.06■□□□□ 0.96
CBX1-201ENST00000225603 RRP1BQ14684 758 aaKnown RBP21.06■□□□□ 0.96
CBX1-201ENST00000225603 TATDN1Q6P1N9 297 aa21.06■□□□□ 0.96
CBX1-201ENST00000225603 DGKHQ86XP1 1220 aa21.06■□□□□ 0.96
CBX1-201ENST00000225603 CLEC10AQ8IUN9 316 aa21.06■□□□□ 0.96
CBX1-201ENST00000225603 SMARCC2Q8TAQ2 1214 aa21.06■□□□□ 0.96
CBX1-201ENST00000225603 NUP133Q8WUM0 1156 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms