RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 GH2P01242 217 aa17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 TM4SF4P48230 202 aa17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 PPIL2Q13356 520 aa17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 ALX1Q15699 326 aa17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 CERKLQ49MI3 558 aaPredicted RBP17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 C16orf86Q6ZW13 317 aa17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 PTPN18Q99952 460 aa17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 NAPBQ9H115 298 aa17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 AFG3L2Q9Y4W6 797 aa17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
SUPT4H1-201ENST00000225504 GUCY1A2P33402 732 aa17.19■□□□□ 0.34
SUPT4H1-201ENST00000225504 CTDSPL2Q05D32 466 aa17.19■□□□□ 0.34
SUPT4H1-201ENST00000225504 DOCK1Q14185 1865 aa17.19■□□□□ 0.34
SUPT4H1-201ENST00000225504 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
SUPT4H1-201ENST00000225504 BRI3BPQ8WY22 251 aa17.19■□□□□ 0.34
SUPT4H1-201ENST00000225504 ZBTB21Q9ULJ3 1066 aa17.19■□□□□ 0.34
SUPT4H1-201ENST00000225504 ATAD5Q96QE3 1844 aa17.19■□□□□ 0.34
SUPT4H1-201ENST00000225504 MANSC4A6NHS7 340 aaPredicted RBP17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 MAP2K1Q02750 393 aaPredicted RBP17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 PPARAQ07869 468 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 ABCB5Q2M3G0 1257 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 KCNH4Q9UQ05 1017 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 PHIPQ8WWQ0 1821 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 TRIM75PA6NK02 468 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 ASNSP08243 561 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 AKR1B1P15121 316 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 MFAP1P55081 439 aaKnown RBP17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 PTH1RQ03431 593 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 SPP2Q13103 211 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 MOGSQ13724 837 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 RNF186Q9NXI6 227 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 SWAP70Q9UH65 585 aa17.18■□□□□ 0.34
SUPT4H1-201ENST00000225504 SGSM2O43147 1006 aa17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 PRDM1O75626 825 aa17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 HSPA1AP0DMV8 641 aaKnown RBP17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 HSPA1BP0DMV9 641 aaKnown RBP17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 RASA1P20936 1047 aa17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 GTF2A2P52657 109 aa17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 DGKZQ13574 1117 aa17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 SEPT2Q15019 361 aa17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 RUFY2Q8WXA3 655 aa17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 TSKSQ9UJT2 592 aa17.17■□□□□ 0.34
SUPT4H1-201ENST00000225504 CCL15-CCL14A0A0B4J2E2 113 aa17.16■□□□□ 0.34
SUPT4H1-201ENST00000225504 MPHOSPH10O00566 681 aaKnown RBP17.16■□□□□ 0.34
SUPT4H1-201ENST00000225504 TRPA1O75762 1119 aa17.16■□□□□ 0.34
SUPT4H1-201ENST00000225504 HAND2P61296 217 aa17.16■□□□□ 0.34
SUPT4H1-201ENST00000225504 SNAPC2Q13487 334 aa17.16■□□□□ 0.34
SUPT4H1-201ENST00000225504 RAB3GAP1Q15042 981 aa17.16■□□□□ 0.34
SUPT4H1-201ENST00000225504 CCL15Q16663 113 aa17.16■□□□□ 0.34
SUPT4H1-201ENST00000225504 IFNL1Q8IU54 200 aa17.16■□□□□ 0.34
SUPT4H1-201ENST00000225504 REM2Q8IYK8 340 aaPredicted RBP17.16■□□□□ 0.34
SUPT4H1-201ENST00000225504 ROBO3Q96MS0 1386 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 CXCL11O14625 94 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 FOXN1O15353 648 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 CETPP11597 493 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 INHBEP58166 350 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 SREBF2Q12772 1141 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 CLEC10AQ8IUN9 316 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 SIAH1Q8IUQ4 282 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 ZNF280CQ8ND82 737 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 WDR18Q9BV38 432 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 NBPF3Q9H094 633 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 R3HDMLQ9H3Y0 253 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 MKNK2Q9HBH9 465 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 CABP5Q9NP86 173 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 ANAPC4Q9UJX5 808 aa17.15■□□□□ 0.34
SUPT4H1-201ENST00000225504 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.33
SUPT4H1-201ENST00000225504 ACER1Q8TDN7 264 aa17.14■□□□□ 0.33
SUPT4H1-201ENST00000225504 CCDC17Q96LX7 622 aa17.14■□□□□ 0.33
SUPT4H1-201ENST00000225504 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
SUPT4H1-201ENST00000225504 DSCC1Q9BVC3 393 aa17.14■□□□□ 0.33
SUPT4H1-201ENST00000225504 GINM1Q9NU53 330 aa17.14■□□□□ 0.33
SUPT4H1-201ENST00000225504 TAOK2Q9UL54 1235 aa17.14■□□□□ 0.33
SUPT4H1-201ENST00000225504 LAMB1P07942 1786 aa17.14■□□□□ 0.33
SUPT4H1-201ENST00000225504 RAD50Q92878 1312 aa17.13■□□□□ 0.33
SUPT4H1-201ENST00000225504 A0A0G2JLL6 359 aaPredicted RBP17.13■□□□□ 0.33
SUPT4H1-201ENST00000225504 BTBD19C9JJ37 291 aa17.13■□□□□ 0.33
SUPT4H1-201ENST00000225504 TBC1D8O95759 1140 aa17.13■□□□□ 0.33
SUPT4H1-201ENST00000225504 GPAT2Q6NUI2 795 aa17.13■□□□□ 0.33
SUPT4H1-201ENST00000225504 PRRT2Q7Z6L0 340 aaPredicted RBP17.13■□□□□ 0.33
SUPT4H1-201ENST00000225504 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
SUPT4H1-201ENST00000225504 MYH8P13535 1937 aa17.13■□□□□ 0.33
SUPT4H1-201ENST00000225504 A0A1W2PRG0 241 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 CDC45O75419 566 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 HMGCS2P54868 508 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 FAM47AQ5JRC9 791 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 TMEM179Q6ZVK1 233 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 TBC1D10CQ8IV04 446 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 BEGAINQ9BUH8 593 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 ZMYM6O95789 1325 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 PDE4BQ07343 736 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 MTMR2Q13614 643 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 GADL1Q6ZQY3 521 aa17.12■□□□□ 0.33
SUPT4H1-201ENST00000225504 AS3MTQ9HBK9 375 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms