RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PTPN14Q15678 1187 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 PPFIBP1Q86W92 1011 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 CKAP2LQ8IYA6 745 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 PRIMPOLQ96LW4 560 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 CNPY2Q9Y2B0 182 aa10.72□□□□□ -0.69
CCDC113-201ENST00000219299 GDF11O95390 407 aa10.71□□□□□ -0.69
CCDC113-201ENST00000219299 DEXIO95424 95 aa10.71□□□□□ -0.69
CCDC113-201ENST00000219299 ME3Q16798 604 aa10.71□□□□□ -0.69
CCDC113-201ENST00000219299 FAM173BQ6P4H8 233 aa10.71□□□□□ -0.69
CCDC113-201ENST00000219299 SH3RF3Q8TEJ3 882 aaPredicted RBP10.71□□□□□ -0.69
CCDC113-201ENST00000219299 ZBTB12Q9Y330 459 aaPredicted RBP10.71□□□□□ -0.69
CCDC113-201ENST00000219299 GBP3Q9H0R5 595 aa10.71□□□□□ -0.69
CCDC113-201ENST00000219299 ZSWIM6Q9HCJ5 1215 aa10.71□□□□□ -0.69
CCDC113-201ENST00000219299 MAGEC2Q9UBF1 373 aaPredicted RBP10.71□□□□□ -0.69
CCDC113-201ENST00000219299 KLHL10Q6JEL2 608 aa10.71□□□□□ -0.69
CCDC113-201ENST00000219299 SPICE1Q8N0Z3 855 aa10.71□□□□□ -0.69
CCDC113-201ENST00000219299 HOMER2Q9NSB8 354 aa10.71□□□□□ -0.69
CCDC113-201ENST00000219299 SLIT3O75094 1523 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 KRT2P35908 639 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 USH1GQ495M9 461 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 C3orf67Q6ZVT6 689 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 KIF18AQ8NI77 898 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 KIFC2Q96AC6 838 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 PI4KBQ9UBF8 816 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 SRGNP10124 158 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 NSMFQ6X4W1 530 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 FILIP1Q7Z7B0 1213 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 FANCBQ8NB91 859 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 CCDC17Q96LX7 622 aa10.71□□□□□ -0.7
CCDC113-201ENST00000219299 CHGBP05060 677 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 DDR1Q08345 913 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 CCDC183Q5T5S1 534 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 CALML4Q96GE6 196 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 ZHX1Q9UKY1 873 aaPredicted RBP10.7□□□□□ -0.7
CCDC113-201ENST00000219299 ZNRF3Q9ULT6 936 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 IRX3P78415 501 aaPredicted RBP10.7□□□□□ -0.7
CCDC113-201ENST00000219299 SUPT20HL1Q3ZLR7 823 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 CT47A1Q5JQC4 288 aaPredicted RBP10.7□□□□□ -0.7
CCDC113-201ENST00000219299 ZNHIT6Q9NWK9 470 aaKnown RBP10.7□□□□□ -0.7
CCDC113-201ENST00000219299 TPCN1Q9ULQ1 816 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 SKIDA1Q1XH10 827 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 LETM2Q2VYF4 491 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 JAKMIP3Q5VZ66 844 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 STYK1Q6J9G0 422 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 DIS3L2Q8IYB7 885 aaKnown RBP10.7□□□□□ -0.7
CCDC113-201ENST00000219299 SMCR8Q8TEV9 937 aaPredicted RBP10.7□□□□□ -0.7
CCDC113-201ENST00000219299 UBA5Q9GZZ9 404 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 DHX36Q9H2U1 1008 aaKnown RBP10.7□□□□□ -0.7
CCDC113-201ENST00000219299 FRMPD2Q68DX3 1309 aaPredicted RBP10.7□□□□□ -0.7
CCDC113-201ENST00000219299 MCM7P33993 719 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 CCDC102AQ96A19 550 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 SCLT1Q96NL6 688 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 MPHOSPH6Q99547 160 aaKnown RBP10.7□□□□□ -0.7
CCDC113-201ENST00000219299 ROBO1Q9Y6N7 1651 aa10.7□□□□□ -0.7
CCDC113-201ENST00000219299 FAM196BA6NMK8 535 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 KLRF2D3W0D1 207 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 POLRMTO00411 1230 aaKnown RBP10.69□□□□□ -0.7
CCDC113-201ENST00000219299 BIN1O00499 593 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 CYP2D6P10635 497 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 PPP2R5BQ15173 497 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 IQCEQ6IPM2 695 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 MXD3Q9BW11 206 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 ZSWIM5Q9P217 1185 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 ZNF142P52746 1687 aaPredicted RBP10.69□□□□□ -0.7
CCDC113-201ENST00000219299 SMTNL1A8MU46 457 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 KLRK1P26718 216 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 ARID4AP29374 1257 aaPredicted RBP10.69□□□□□ -0.7
CCDC113-201ENST00000219299 SP4Q02446 784 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 ODF2Q5BJF6 829 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 LLPHQ9BRT6 129 aaKnown RBP10.69□□□□□ -0.7
CCDC113-201ENST00000219299 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 KCNJ14Q9UNX9 436 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 MON2Q7Z3U7 1717 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 MYO3BQ8WXR4 1341 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 PHLPP1O60346 1717 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 SLFN13Q68D06 897 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 CCDC174Q6PII3 467 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 VPS54Q9P1Q0 977 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 PXDNLA1KZ92 1463 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 ERLIN2O94905 339 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 CFBP00751 764 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 KCNG4Q8TDN1 519 aa10.69□□□□□ -0.7
CCDC113-201ENST00000219299 SPTLC2O15270 562 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 BMP15O95972 392 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 TOP1P11387 765 aaKnown RBP10.68□□□□□ -0.7
CCDC113-201ENST00000219299 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
CCDC113-201ENST00000219299 MAPK8IP2Q13387 824 aaPredicted RBP10.68□□□□□ -0.7
CCDC113-201ENST00000219299 GIMAP7Q8NHV1 300 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 CHURC1Q8WUH1 139 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 TXLNBQ8N3L3 684 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 ZNF274Q96GC6 653 aaPredicted RBP10.68□□□□□ -0.7
CCDC113-201ENST00000219299 INCENPQ9NQS7 918 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 NECTIN1Q15223 517 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 ISM2Q6H9L7 571 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 FAM177A1Q8N128 213 aaPredicted RBP10.68□□□□□ -0.7
CCDC113-201ENST00000219299 SLC44A5Q8NCS7 719 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 NEMFO60524 1076 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms