RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SAMD1Q6SPF0 538 aaPredicted RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 KBTBD3Q8NAB2 608 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 BBOF1Q8ND07 529 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 ZCRB1Q8TBF4 217 aaKnown RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 XAGE3Q8WTP9 111 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 HOOK2Q96ED9 719 aa4.92□□□□□ -1.62
CHD9-201ENST00000219084 NOC4LQ9BVI4 516 aaKnown RBP4.92□□□□□ -1.62
CHD9-201ENST00000219084 MYH6P13533 1939 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 MACROD2A1Z1Q3 448 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 H0YCG3 227 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 ATP5JP18859 108 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 MXRA7P84157 204 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 SLMAPQ14BN4 828 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 NECAB1Q8N987 351 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 MAK16Q9BXY0 300 aaKnown RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 RBSNQ9H1K0 784 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 THEGQ9P2T0 379 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 CTNND2Q9UQB3 1225 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 RPAP1Q9BWH6 1393 aaPredicted RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 IKBKBO14920 756 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 DHX58Q96C10 678 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 MIS12Q9H081 205 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 STAP2Q9UGK3 403 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 SAR1BQ9Y6B6 198 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 ZMYM6O95789 1325 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 hCG_1984214I3L0E3 225 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 I3L4J1 428 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 THAP12O43422 761 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 MARCKSP29966 332 aaPredicted RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 ASIC2Q16515 512 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 TNNI3KQ59H18 835 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 NBPF14Q5TI25 921 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 KRT28Q7Z3Y7 464 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 ZNF713Q8N859 430 aaPredicted RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 BICC1Q9H694 974 aaKnown RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 SNX14Q9Y5W7 946 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 FPGT-TNNI3KV9GXZ4 949 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 ARHGEF40Q8TER5 1519 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 ADCY9O60503 1353 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 RLBP1P12271 317 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 IL13P35225 146 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 PHBP35232 272 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 SLFNL1Q499Z3 407 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 WDR44Q5JSH3 913 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 RAB3IL1Q8TBN0 382 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 SPZ1Q9BXG8 430 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 CNOT10Q9H9A5 744 aaKnown RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 LARSQ9P2J5 1176 aaKnown RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 FAN1Q9Y2M0 1017 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 DMTNQ08495 405 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 UBLCP1Q8WVY7 318 aaPredicted RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 ATP2A3Q93084 1043 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 LZTFL1Q9NQ48 299 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 KIAA1468Q9P260 1216 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 EFCAB13Q8IY85 973 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 SMARCC2Q8TAQ2 1214 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 TEKT1Q969V4 418 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 Q9H521 79 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 MMRN2Q9H8L6 949 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 PPP1R1BQ9UD71 204 aaPredicted RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 ANKARQ7Z5J8 1434 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 DNM2P50570 870 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 NBPF5PQ86XG9 351 aaPredicted RBP4.91□□□□□ -1.62
CHD9-201ENST00000219084 BPIFA3Q9BQP9 254 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 DLC1Q96QB1 1528 aa4.91□□□□□ -1.62
CHD9-201ENST00000219084 NLRP1Q9C000 1473 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 USP19O94966 1318 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 A0A1B0GVL5 298 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 FAM177BA6PVY3 158 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 TCP1P17987 556 aaKnown RBP4.9□□□□□ -1.62
CHD9-201ENST00000219084 SCLT1Q96NL6 688 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 HOMER3Q9NSC5 361 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 STX8Q9UNK0 236 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 SAMM50Q9Y512 469 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 FAM83GA6ND36 823 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 H7C1D1 291 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 RNMTO43148 476 aaKnown RBP4.9□□□□□ -1.62
CHD9-201ENST00000219084 PFKFB2O60825 505 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 CMA1P23946 247 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 ERCC5P28715 1186 aaPredicted RBP4.9□□□□□ -1.62
CHD9-201ENST00000219084 SARNPP82979 210 aaKnown RBP4.9□□□□□ -1.62
CHD9-201ENST00000219084 INF2Q27J81 1249 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 LRRC8AQ8IWT6 810 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 CCHCR1Q8TD31 782 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 NLRP3Q96P20 1036 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 SETDB2Q96T68 719 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 SELENOSQ9BQE4 189 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 HAUS4Q9H6D7 363 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 ZSWIM6Q9HCJ5 1215 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 POLR3EQ9NVU0 708 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 LRRC7Q96NW7 1537 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 EYA2O00167 538 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 IL2RBP14784 551 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 HAND2P61296 217 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 LMNB2Q03252 620 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 TBC1D8BQ0IIM8 1120 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 SEPT2Q15019 361 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 SFMBT2Q5VUG0 894 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 TTC6Q86TZ1 520 aa4.9□□□□□ -1.62
CHD9-201ENST00000219084 MAGEB6Q8N7X4 407 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 750 ms