RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 GRAPQ13588 217 aa11.54□□□□□ -0.56
USP11-201ENST00000218348 GRAPLQ8TC17 118 aaPredicted RBP11.54□□□□□ -0.56
USP11-201ENST00000218348 FUCA2Q9BTY2 467 aa11.54□□□□□ -0.56
USP11-201ENST00000218348 CBX8Q9HC52 389 aa11.54□□□□□ -0.56
USP11-201ENST00000218348 ZNF165P49910 485 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 NDUFA8P51970 172 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 TGFB2P61812 414 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 GRIK5Q16478 980 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 CPLX2Q6PUV4 134 aaKnown RBP11.53□□□□□ -0.56
USP11-201ENST00000218348 NLGN2Q8NFZ4 835 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 ZNF592Q92610 1267 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 CLSTN2Q9H4D0 955 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 ELP1O95163 1332 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 CHRNA5P30532 468 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 TRIM29Q14134 588 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 MYSM1Q5VVJ2 828 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 CCDC88AQ3V6T2 1871 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 TIAM2Q8IVF5 1701 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 COL1A1P02452 1464 aaPredicted RBP11.53□□□□□ -0.56
USP11-201ENST00000218348 BTBD18B2RXH4 712 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 OLFM4Q6UX06 510 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 C11orf57Q6ZUT1 292 aaPredicted RBP11.53□□□□□ -0.56
USP11-201ENST00000218348 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
USP11-201ENST00000218348 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
USP11-201ENST00000218348 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.53□□□□□ -0.56
USP11-201ENST00000218348 ZNF804BA4D1E1 1349 aa11.52□□□□□ -0.56
USP11-201ENST00000218348 ZMYM6O95789 1325 aa11.52□□□□□ -0.56
USP11-201ENST00000218348 NPR1P16066 1061 aa11.52□□□□□ -0.56
USP11-201ENST00000218348 PDE6BP35913 854 aa11.52□□□□□ -0.56
USP11-201ENST00000218348 KIF23Q02241 960 aaPredicted RBP11.52□□□□□ -0.56
USP11-201ENST00000218348 NR5A1Q13285 461 aa11.52□□□□□ -0.56
USP11-201ENST00000218348 UBE4AQ14139 1066 aa11.52□□□□□ -0.56
USP11-201ENST00000218348 RTN1Q16799 776 aa11.52□□□□□ -0.56
USP11-201ENST00000218348 DZIP1Q86YF9 867 aaKnown RBP11.52□□□□□ -0.56
USP11-201ENST00000218348 DDX19AQ9NUU7 478 aaKnown RBP11.52□□□□□ -0.56
USP11-201ENST00000218348 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.56
USP11-201ENST00000218348 RCOR1Q9UKL0 485 aa11.52□□□□□ -0.56
USP11-201ENST00000218348 TNKSO95271 1327 aa11.52□□□□□ -0.57
USP11-201ENST00000218348 SPTLC2O15270 562 aa11.52□□□□□ -0.57
USP11-201ENST00000218348 SSRP1Q08945 709 aaKnown RBP11.52□□□□□ -0.57
USP11-201ENST00000218348 SART3Q15020 963 aaKnown RBP11.52□□□□□ -0.57
USP11-201ENST00000218348 CCDC39Q9UFE4 941 aa11.52□□□□□ -0.57
USP11-201ENST00000218348 SAP30BPQ9UHR5 308 aaKnown RBP11.52□□□□□ -0.57
USP11-201ENST00000218348 F8W031 263 aaPredicted RBP11.52□□□□□ -0.57
USP11-201ENST00000218348 USP17L8P0C7I0 530 aa11.52□□□□□ -0.57
USP11-201ENST00000218348 DPEP1P16444 411 aa11.52□□□□□ -0.57
USP11-201ENST00000218348 MASTLQ96GX5 879 aa11.52□□□□□ -0.57
USP11-201ENST00000218348 SPON1Q9HCB6 807 aa11.52□□□□□ -0.57
USP11-201ENST00000218348 NRBP1Q9UHY1 535 aa11.52□□□□□ -0.57
USP11-201ENST00000218348 RIMBP2O15034 1052 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 HSP90AA4PQ58FG1 418 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 DYNLL2Q96FJ2 89 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 RTFDC1Q9BY42 306 aaPredicted RBP11.51□□□□□ -0.57
USP11-201ENST00000218348 MAST2Q6P0Q8 1798 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 LOC102724159A0A0B4J2E5 919 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 PWP2Q15269 919 aaKnown RBP11.51□□□□□ -0.57
USP11-201ENST00000218348 PDILTQ8N807 584 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 LINC00301Q8NCQ3 95 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 FAM200AQ8TCP9 573 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 OXER1Q8TDS5 423 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 TMEM87BQ96K49 555 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 CCDC94Q9BW85 323 aaPredicted RBP11.51□□□□□ -0.57
USP11-201ENST00000218348 TRIM34Q9BYJ4 488 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 KRT23Q9C075 422 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 MCM9Q9NXL9 1143 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 ZKSCAN5Q9Y2L8 839 aa11.51□□□□□ -0.57
USP11-201ENST00000218348 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 WDHD1O75717 1129 aaPredicted RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 PRELPP51888 382 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 PTPN21Q16825 1174 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 ANO1Q5XXA6 986 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 ZNF654Q8IZM8 581 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 RPGRQ92834 1020 aaKnown RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 RIOK1Q9BRS2 568 aaKnown RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 VPS54Q9P1Q0 977 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 PLEKHA8P1O95397 391 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 EVCP57679 992 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 SNW1Q13573 536 aaKnown RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 ZRSR1Q15695 479 aaKnown RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 SLC44A5Q8NCS7 719 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 MRPS27Q92552 414 aaKnown RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 TRERF1Q96PN7 1200 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 NOL7Q9UMY1 257 aaKnown RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 MYH7P12883 1935 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 BECN2A8MW95 431 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 C6orf229H3BNL8 230 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 C15orf52Q6ZUT6 534 aaKnown RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 NSUN4Q96CB9 384 aaKnown RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 GTPBP4Q9BZE4 634 aaKnown RBP11.5□□□□□ -0.57
USP11-201ENST00000218348 ATP6V0A2Q9Y487 856 aa11.5□□□□□ -0.57
USP11-201ENST00000218348 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 USP5P45974 858 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 NTRK3Q16288 839 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 IFIT1BQ5T764 474 aaKnown RBP11.49□□□□□ -0.57
USP11-201ENST00000218348 CTR9Q6PD62 1173 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 C2CD5Q86YS7 1000 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 CNNM2Q9H8M5 875 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 V9GY48 417 aaPredicted RBP11.49□□□□□ -0.57
USP11-201ENST00000218348 GOLGA6L19H0YKK7 550 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 CDKL5O76039 1030 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms