RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 DCP1AQ9NPI6 582 aaPredicted RBP10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 CICQ96RK0 1608 aaPredicted RBP10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 EVCP57679 992 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 ZNF654Q8IZM8 581 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 FBXL16Q8N461 479 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 FBXO18Q8NFZ0 1043 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 TDRD7Q8NHU6 1098 aaKnown RBP10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 TBC1D16Q8TBP0 767 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 ATP8A2Q9NTI2 1148 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 POLLQ9UGP5 575 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 TACC3Q9Y6A5 838 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 ZNF831Q5JPB2 1677 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 LAMA4Q16363 1823 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 SBF2Q86WG5 1849 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 PDE6BP35913 854 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 SF3B2Q13435 895 aaKnown RBP10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 CRY2Q49AN0 593 aa10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 SH3RF3Q8TEJ3 882 aaPredicted RBP10.27□□□□□ -0.77
MTHFD1-201ENST00000216605 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 WASF1Q92558 559 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 CRAMP1Q96RY5 1269 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 ZSCAN10Q96SZ4 725 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 LAMB2P55268 1798 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 hCG_1642624A0A1W2PR95 340 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 ALDH1B1P30837 517 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 GTF2F1P35269 517 aaKnown RBP eCLIP10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 BTDP43251 543 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 GRIK5Q16478 980 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 KRT40Q6A162 431 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 SGMS1Q86VZ5 419 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 TEX11Q8IYF3 940 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 ZNF444Q8N0Y2 327 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 FANCBQ8NB91 859 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 ARPP21Q9UBL0 812 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 TAF1LQ8IZX4 1826 aa10.26□□□□□ -0.77
MTHFD1-201ENST00000216605 NPR1P16066 1061 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 EVX2Q03828 476 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 PICALMQ13492 652 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 CCAR1Q8IX12 1150 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 LY75O60449 1722 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 CCDC66A2RUB6 948 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 NMT2O60551 498 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 ZRSR1Q15695 479 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 C2CD5Q86YS7 1000 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 SLF2Q8IX21 1173 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 CTCFLQ8NI51 663 aaPredicted RBP10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 DYNLL2Q96FJ2 89 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 TRIM34Q9BYJ4 488 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 STK32BQ9NY57 414 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 SH3BP1Q9Y3L3 701 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 ELP1O95163 1332 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 SALL1Q9NSC2 1324 aa10.25□□□□□ -0.77
MTHFD1-201ENST00000216605 H0YIN7 160 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 UBE2Q2LH0YL09 131 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 ADCY5O95622 1261 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 CBX1P83916 185 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 SP8Q8IXZ3 490 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 USP25Q9UHP3 1055 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 KCNJ14Q9UNX9 436 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 KINO60870 393 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 NR1I2O75469 434 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 TPM3P06753 285 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 TSPY3P0CV98 308 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 TSPY8P0CW00 308 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 CCDC192P0DO97 292 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 XBP1P17861 261 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 RBM5P52756 815 aaKnown RBP eCLIP10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 TFAP4Q01664 338 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 EZH2Q15910 746 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 ENAHQ8N8S7 591 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 FSIP1Q8NA03 581 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 SGSM3Q96HU1 749 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 EFCC1Q9HA90 598 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 STX8Q9UNK0 236 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 SRGNP10124 158 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 MARCKSP29966 332 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 HOXA10P31260 410 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 ZNF771Q7L3S4 317 aaPredicted RBP10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 BRAPQ7Z569 592 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 TBC1D22AQ8WUA7 517 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 AKT1S1Q96B36 256 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 PGBD1Q96JS3 809 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 SDF4Q9BRK5 362 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 KAT14Q9H8E8 782 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 ATP6V0A2Q9Y487 856 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 CLIC4Q9Y696 253 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 BRWD3Q6RI45 1802 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 PDS5AQ29RF7 1337 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 ARAP2Q8WZ64 1704 aa10.24□□□□□ -0.77
MTHFD1-201ENST00000216605 LOC102724159A0A0B4J2E5 919 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 SCNN1DP51172 638 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 PWP2Q15269 919 aaKnown RBP10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 MYSM1Q5VVJ2 828 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 TMC4Q7Z404 712 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 ZBTB9Q96C00 473 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 MASTLQ96GX5 879 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 DDX19AQ9NUU7 478 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms