RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CNNM3Q8NE01 707 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 OGFRQ9NZT2 677 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 CGNQ9P2M7 1197 aaKnown RBP15.09■□□□□ 0.01
CTNS-201ENST00000046640 CCNL1Q9UK58 526 aaPredicted RBP15.09■□□□□ 0.01
CTNS-201ENST00000046640 KCNH3Q9ULD8 1083 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 AHDC1Q5TGY3 1603 aaPredicted RBP15.08■□□□□ 0.01
CTNS-201ENST00000046640 NOM1Q5C9Z4 860 aaKnown RBP15.08■□□□□ 0.01
CTNS-201ENST00000046640 IFIT1BQ5T764 474 aaKnown RBP15.08■□□□□ 0.01
CTNS-201ENST00000046640 CTR9Q6PD62 1173 aa15.08■□□□□ 0.01
CTNS-201ENST00000046640 SYT10Q6XYQ8 523 aa15.08■□□□□ 0.01
CTNS-201ENST00000046640 USP49Q70CQ1 688 aa15.08■□□□□ 0.01
CTNS-201ENST00000046640 FOXP4Q8IVH2 680 aaPredicted RBP15.08■□□□□ 0.01
CTNS-201ENST00000046640 LRRN4CLQ8ND94 238 aa15.08■□□□□ 0.01
CTNS-201ENST00000046640 SHISA4Q96DD7 197 aa15.08■□□□□ 0.01
CTNS-201ENST00000046640 HIBADHP31937 336 aaKnown RBP15.08■□□□□ 0
CTNS-201ENST00000046640 NLRP12P59046 1061 aa15.08■□□□□ 0
CTNS-201ENST00000046640 AKAP17AQ02040 695 aaKnown RBP15.08■□□□□ 0
CTNS-201ENST00000046640 ZSCAN10Q96SZ4 725 aaPredicted RBP15.08■□□□□ 0
CTNS-201ENST00000046640 GTPBP4Q9BZE4 634 aaKnown RBP15.08■□□□□ 0
CTNS-201ENST00000046640 RTL9Q8NET4 1388 aa15.08■□□□□ 0
CTNS-201ENST00000046640 EARS2Q5JPH6 523 aaKnown RBP15.07■□□□□ 0
CTNS-201ENST00000046640 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
CTNS-201ENST00000046640 KIF18AQ8NI77 898 aa15.07■□□□□ 0
CTNS-201ENST00000046640 ARHGEF1Q92888 912 aaKnown RBP15.07■□□□□ 0
CTNS-201ENST00000046640 TMX1Q9H3N1 280 aa15.07■□□□□ 0
CTNS-201ENST00000046640 ST7Q9NRC1 585 aa15.07■□□□□ 0
CTNS-201ENST00000046640 PPP6R2O75170 966 aa15.07■□□□□ 0
CTNS-201ENST00000046640 DEXIO95424 95 aa15.07■□□□□ 0
CTNS-201ENST00000046640 RBM6P78332 1123 aaKnown RBP15.07■□□□□ 0
CTNS-201ENST00000046640 SEC23AQ15436 765 aa15.07■□□□□ 0
CTNS-201ENST00000046640 ZNF827Q17R98 1081 aa15.07■□□□□ 0
CTNS-201ENST00000046640 METTL16Q86W50 562 aaKnown RBP15.07■□□□□ 0
CTNS-201ENST00000046640 HOMER1Q86YM7 354 aa15.07■□□□□ 0
CTNS-201ENST00000046640 WASF1Q92558 559 aa15.07■□□□□ 0
CTNS-201ENST00000046640 NSUN4Q96CB9 384 aaKnown RBP15.07■□□□□ 0
CTNS-201ENST00000046640 PHLPP1O60346 1717 aa15.07■□□□□ 0
CTNS-201ENST00000046640 BCL9LQ86UU0 1499 aa15.07■□□□□ 0
CTNS-201ENST00000046640 POLR2DO15514 142 aaKnown RBP15.07■□□□□ 0
CTNS-201ENST00000046640 RESP18Q5W5W9 173 aa15.07■□□□□ 0
CTNS-201ENST00000046640 KRI1Q8N9T8 703 aaKnown RBP15.07■□□□□ 0
CTNS-201ENST00000046640 ANKIB1Q9P2G1 1089 aa15.07■□□□□ 0
CTNS-201ENST00000046640 PCDHA5Q9Y5H7 936 aa15.07■□□□□ 0
CTNS-201ENST00000046640 CCDC196A0A1B0GTZ2 297 aa15.06■□□□□ 0
CTNS-201ENST00000046640 UBAP1LF5GYI3 381 aa15.06■□□□□ 0
CTNS-201ENST00000046640 ARMCX5Q6P1M9 558 aa15.06■□□□□ 0
CTNS-201ENST00000046640 FBXO38Q6PIJ6 1188 aa15.06■□□□□ 0
CTNS-201ENST00000046640 TPTE2Q6XPS3 522 aa15.06■□□□□ 0
CTNS-201ENST00000046640 NYAP1Q6ZVC0 841 aa15.06■□□□□ 0
CTNS-201ENST00000046640 FEZ1Q99689 392 aa15.06■□□□□ 0
CTNS-201ENST00000046640 NARFQ9UHQ1 456 aa15.06■□□□□ 0
CTNS-201ENST00000046640 HPSEQ9Y251 543 aa15.06■□□□□ 0
CTNS-201ENST00000046640 COL22A1Q8NFW1 1626 aaPredicted RBP15.06■□□□□ 0
CTNS-201ENST00000046640 TOM1O60784 492 aa15.06■□□□□ 0
CTNS-201ENST00000046640 ERCC6LQ2NKX8 1250 aa15.06■□□□□ 0
CTNS-201ENST00000046640 TMTC2Q8N394 836 aa15.06■□□□□ 0
CTNS-201ENST00000046640 RTCBQ9Y3I0 505 aaKnown RBP15.06■□□□□ 0
CTNS-201ENST00000046640 VEGFAP15692 232 aaPredicted RBP15.05■□□□□ 0
CTNS-201ENST00000046640 NCAPHQ15003 741 aa15.05■□□□□ 0
CTNS-201ENST00000046640 E4F1Q66K89 784 aaPredicted RBP15.05■□□□□ 0
CTNS-201ENST00000046640 FBXO33Q7Z6M2 555 aa15.05■□□□□ 0
CTNS-201ENST00000046640 CATIPQ7Z7H3 387 aa15.05■□□□□ 0
CTNS-201ENST00000046640 IQCA1Q86XH1 822 aa15.05■□□□□ 0
CTNS-201ENST00000046640 DDX41Q9UJV9 622 aaKnown RBP15.05■□□□□ 0
CTNS-201ENST00000046640 BAZ2AQ9UIF9 1905 aaKnown RBP15.05■□□□□ -0
CTNS-201ENST00000046640 WNT7AO00755 349 aa15.05■□□□□ -0
CTNS-201ENST00000046640 NEMFO60524 1076 aa15.05■□□□□ -0
CTNS-201ENST00000046640 CUTAO60888 179 aa15.05■□□□□ -0
CTNS-201ENST00000046640 RPS6KA4O75676 772 aa15.05■□□□□ -0
CTNS-201ENST00000046640 USP17L8P0C7I0 530 aa15.05■□□□□ -0
CTNS-201ENST00000046640 PRR29P0C7W0 189 aa15.05■□□□□ -0
CTNS-201ENST00000046640 KRBA2Q6ZNG9 492 aa15.05■□□□□ -0
CTNS-201ENST00000046640 SERTAD1Q9UHV2 236 aa15.05■□□□□ -0
CTNS-201ENST00000046640 SFPQP23246 707 aaKnown RBP eCLIP15.04■□□□□ -0
CTNS-201ENST00000046640 CASP1P29466 404 aa15.04■□□□□ -0
CTNS-201ENST00000046640 DPF2Q92785 391 aa15.04■□□□□ -0
CTNS-201ENST00000046640 ZBTB9Q96C00 473 aa15.04■□□□□ -0
CTNS-201ENST00000046640 DCP1AQ9NPI6 582 aaPredicted RBP15.04■□□□□ -0
CTNS-201ENST00000046640 MCM9Q9NXL9 1143 aa15.04■□□□□ -0
CTNS-201ENST00000046640 STK36Q9NRP7 1315 aa15.04■□□□□ -0
CTNS-201ENST00000046640 CICQ96RK0 1608 aaPredicted RBP15.04■□□□□ -0
CTNS-201ENST00000046640 WNK3Q9BYP7 1800 aa15.04■□□□□ -0
CTNS-201ENST00000046640 PDE4BQ07343 736 aa15.04■□□□□ -0
CTNS-201ENST00000046640 NFIXQ14938 502 aa15.04■□□□□ -0
CTNS-201ENST00000046640 DIXDC1Q155Q3 683 aa15.04■□□□□ -0
CTNS-201ENST00000046640 PKN1Q16512 942 aa15.04■□□□□ -0
CTNS-201ENST00000046640 SLU7O95391 586 aaKnown RBP15.03■□□□□ -0
CTNS-201ENST00000046640 RFC4P35249 363 aa15.03■□□□□ -0
CTNS-201ENST00000046640 GRIK5Q16478 980 aa15.03■□□□□ -0
CTNS-201ENST00000046640 DZIP1Q86YF9 867 aaKnown RBP15.03■□□□□ -0
CTNS-201ENST00000046640 DYNLL2Q96FJ2 89 aa15.03■□□□□ -0
CTNS-201ENST00000046640 PPP1R13BQ96KQ4 1090 aa15.03■□□□□ -0
CTNS-201ENST00000046640 CSRNP2Q9H175 543 aa15.03■□□□□ -0
CTNS-201ENST00000046640 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.03■□□□□ -0
CTNS-201ENST00000046640 FBXO2Q9UK22 296 aaPredicted RBP15.03■□□□□ -0
CTNS-201ENST00000046640 USP21Q9UK80 565 aa15.03■□□□□ -0
CTNS-201ENST00000046640 MYH2Q9UKX2 1941 aa15.03■□□□□ -0
CTNS-201ENST00000046640 ADAMTS3O15072 1205 aa15.03■□□□□ -0
CTNS-201ENST00000046640 SERPINC1P01008 464 aa15.03■□□□□ -0
CTNS-201ENST00000046640 BMP6P22004 513 aa15.03■□□□□ -0
CTNS-201ENST00000046640 ZNF174Q15697 407 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms