RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 OXER1Q8TDS5 423 aa30.09■■■□□ 2.41
RTN4R-201ENST00000043402 FBXW7Q969H0 707 aa30.09■■■□□ 2.41
RTN4R-201ENST00000043402 ARPP21Q9UBL0 812 aaPredicted RBP30.09■■■□□ 2.41
RTN4R-201ENST00000043402 PLEKHA8P1O95397 391 aa30.08■■■□□ 2.41
RTN4R-201ENST00000043402 FAM47AQ5JRC9 791 aa30.08■■■□□ 2.41
RTN4R-201ENST00000043402 PIBF1Q8WXW3 757 aa30.08■■■□□ 2.41
RTN4R-201ENST00000043402 RPGRQ92834 1020 aaKnown RBP30.08■■■□□ 2.41
RTN4R-201ENST00000043402 GOLGA6L19H0YKK7 550 aa30.08■■■□□ 2.41
RTN4R-201ENST00000043402 SERPINB2P05120 415 aa30.08■■■□□ 2.41
RTN4R-201ENST00000043402 LDHBP07195 334 aaKnown RBP30.08■■■□□ 2.41
RTN4R-201ENST00000043402 GPSM2P81274 684 aa30.08■■■□□ 2.41
RTN4R-201ENST00000043402 MKRN1Q9UHC7 482 aaKnown RBP30.08■■■□□ 2.41
RTN4R-201ENST00000043402 FAM237AA0A1B0GTK4 181 aa30.07■■■□□ 2.4
RTN4R-201ENST00000043402 QTRT2Q9H974 415 aaKnown RBP30.07■■■□□ 2.4
RTN4R-201ENST00000043402 SLC3A2P08195 630 aaKnown RBP30.07■■■□□ 2.4
RTN4R-201ENST00000043402 USP17L8P0C7I0 530 aa30.07■■■□□ 2.4
RTN4R-201ENST00000043402 SYKP43405 635 aa30.07■■■□□ 2.4
RTN4R-201ENST00000043402 RESP18Q5W5W9 173 aa30.07■■■□□ 2.4
RTN4R-201ENST00000043402 hCG_1642624A0A1W2PR95 340 aa30.06■■■□□ 2.4
RTN4R-201ENST00000043402 GOLGA6L6A8MZA4 724 aa30.06■■■□□ 2.4
RTN4R-201ENST00000043402 SLC4A8Q2Y0W8 1093 aa30.06■■■□□ 2.4
RTN4R-201ENST00000043402 C15orf52Q6ZUT6 534 aaKnown RBP30.06■■■□□ 2.4
RTN4R-201ENST00000043402 CEP57L1Q8IYX8 460 aa30.06■■■□□ 2.4
RTN4R-201ENST00000043402 C17orf53Q8N3J3 647 aaPredicted RBP30.06■■■□□ 2.4
RTN4R-201ENST00000043402 MCM9Q9NXL9 1143 aa30.06■■■□□ 2.4
RTN4R-201ENST00000043402 DIXDC1Q155Q3 683 aa30.05■■■□□ 2.4
RTN4R-201ENST00000043402 DPCR1Q3MIW9 517 aa30.05■■■□□ 2.4
RTN4R-201ENST00000043402 SARM1Q6SZW1 724 aa30.05■■■□□ 2.4
RTN4R-201ENST00000043402 ZNF804AQ7Z570 1209 aa30.05■■■□□ 2.4
RTN4R-201ENST00000043402 TIGD1Q96MW7 591 aa30.05■■■□□ 2.4
RTN4R-201ENST00000043402 CUTAO60888 179 aa30.05■■■□□ 2.4
RTN4R-201ENST00000043402 NRBP1Q9UHY1 535 aa30.05■■■□□ 2.4
RTN4R-201ENST00000043402 PRPF3O43395 683 aaKnown RBP30.04■■■□□ 2.4
RTN4R-201ENST00000043402 TPM3P06753 285 aa30.04■■■□□ 2.4
RTN4R-201ENST00000043402 PTGS1P23219 599 aa30.04■■■□□ 2.4
RTN4R-201ENST00000043402 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.04■■■□□ 2.4
RTN4R-201ENST00000043402 RBM28Q9NW13 759 aaKnown RBP30.04■■■□□ 2.4
RTN4R-201ENST00000043402 VPS54Q9P1Q0 977 aa30.04■■■□□ 2.4
RTN4R-201ENST00000043402 V9GY48 417 aaPredicted RBP30.04■■■□□ 2.4
RTN4R-201ENST00000043402 BECN2A8MW95 431 aa30.04■■■□□ 2.4
RTN4R-201ENST00000043402 DDAH1O94760 285 aa30.04■■■□□ 2.4
RTN4R-201ENST00000043402 RILPL1Q5EBL4 403 aa30.04■■■□□ 2.4
RTN4R-201ENST00000043402 SLC27A3Q5K4L6 730 aa30.04■■■□□ 2.4
RTN4R-201ENST00000043402 SH3RF3Q8TEJ3 882 aaPredicted RBP30.04■■■□□ 2.4
RTN4R-201ENST00000043402 CALM1P0DP23 149 aa30.03■■■□□ 2.4
RTN4R-201ENST00000043402 CALM2P0DP24 149 aa30.03■■■□□ 2.4
RTN4R-201ENST00000043402 CALM3P0DP25 149 aa30.03■■■□□ 2.4
RTN4R-201ENST00000043402 ST5P78524 1137 aa30.03■■■□□ 2.4
RTN4R-201ENST00000043402 AKAP17AQ02040 695 aaKnown RBP30.03■■■□□ 2.4
RTN4R-201ENST00000043402 AOPEPQ8N6M6 819 aa30.03■■■□□ 2.4
RTN4R-201ENST00000043402 PCDHB6Q9Y5E3 794 aa30.03■■■□□ 2.4
RTN4R-201ENST00000043402 PDE4BQ07343 736 aa30.03■■■□□ 2.4
RTN4R-201ENST00000043402 NOLC1Q14978 699 aaKnown RBP eCLIP30.03■■■□□ 2.4
RTN4R-201ENST00000043402 TMTC3Q6ZXV5 915 aa30.03■■■□□ 2.4
RTN4R-201ENST00000043402 PYCARDQ9ULZ3 195 aa30.03■■■□□ 2.4
RTN4R-201ENST00000043402 BIN1O00499 593 aa30.02■■■□□ 2.4
RTN4R-201ENST00000043402 TRIM37O94972 964 aa30.02■■■□□ 2.4
RTN4R-201ENST00000043402 DDR1Q08345 913 aa30.02■■■□□ 2.4
RTN4R-201ENST00000043402 C12orf60Q5U649 245 aa30.02■■■□□ 2.4
RTN4R-201ENST00000043402 CCDC186Q7Z3E2 898 aa30.02■■■□□ 2.4
RTN4R-201ENST00000043402 KRI1Q8N9T8 703 aaKnown RBP30.02■■■□□ 2.4
RTN4R-201ENST00000043402 UFL1O94874 794 aa30.01■■■□□ 2.4
RTN4R-201ENST00000043402 GRIN1Q05586 938 aa30.01■■■□□ 2.4
RTN4R-201ENST00000043402 DRC7Q8IY82 874 aa30.01■■■□□ 2.4
RTN4R-201ENST00000043402 PHF20Q9BVI0 1012 aa30.01■■■□□ 2.4
RTN4R-201ENST00000043402 NAT10Q9H0A0 1025 aaKnown RBP30.01■■■□□ 2.4
RTN4R-201ENST00000043402 RBM6P78332 1123 aaKnown RBP30.01■■■□□ 2.39
RTN4R-201ENST00000043402 RCSD1Q6JBY9 416 aa30.01■■■□□ 2.39
RTN4R-201ENST00000043402 CD209Q9NNX6 404 aa30.01■■■□□ 2.39
RTN4R-201ENST00000043402 CABP5Q9NP86 173 aa30.01■■■□□ 2.39
RTN4R-201ENST00000043402 R3HCC1Q9Y3T6 440 aaKnown RBP30.01■■■□□ 2.39
RTN4R-201ENST00000043402 TSPY2A6NKD2 308 aa30■■■□□ 2.39
RTN4R-201ENST00000043402 IGSF3O75054 1194 aa30■■■□□ 2.39
RTN4R-201ENST00000043402 USP5P45974 858 aa30■■■□□ 2.39
RTN4R-201ENST00000043402 SPECC1Q5M775 1068 aa30■■■□□ 2.39
RTN4R-201ENST00000043402 SRBD1Q8N5C6 995 aaKnown RBP30■■■□□ 2.39
RTN4R-201ENST00000043402 FBXO2Q9UK22 296 aaPredicted RBP30■■■□□ 2.39
RTN4R-201ENST00000043402 BRWD3Q6RI45 1802 aa30■■■□□ 2.39
RTN4R-201ENST00000043402 NLRP12P59046 1061 aa30■■■□□ 2.39
RTN4R-201ENST00000043402 KIAA1524Q8TCG1 905 aa30■■■□□ 2.39
RTN4R-201ENST00000043402 RBM17Q96I25 401 aaKnown RBP30■■■□□ 2.39
RTN4R-201ENST00000043402 BAZ2BQ9UIF8 2168 aaKnown RBP30■■■□□ 2.39
RTN4R-201ENST00000043402 CNTNAP5Q8WYK1 1306 aa29.99■■■□□ 2.39
RTN4R-201ENST00000043402 FAM205CA6NFA0 338 aa29.99■■■□□ 2.39
RTN4R-201ENST00000043402 PTPREP23469 700 aa29.99■■■□□ 2.39
RTN4R-201ENST00000043402 PPP4CP60510 307 aa29.99■■■□□ 2.39
RTN4R-201ENST00000043402 DYNLL2Q96FJ2 89 aa29.99■■■□□ 2.39
RTN4R-201ENST00000043402 CLIP2Q9UDT6 1046 aa29.99■■■□□ 2.39
RTN4R-201ENST00000043402 KCNH3Q9ULD8 1083 aa29.99■■■□□ 2.39
RTN4R-201ENST00000043402 CDC25BP30305 580 aa29.98■■■□□ 2.39
RTN4R-201ENST00000043402 LONRF3Q496Y0 759 aa29.98■■■□□ 2.39
RTN4R-201ENST00000043402 EARS2Q5JPH6 523 aaKnown RBP29.98■■■□□ 2.39
RTN4R-201ENST00000043402 TUBE1Q9UJT0 475 aa29.98■■■□□ 2.39
RTN4R-201ENST00000043402 XBP1P17861 261 aa29.98■■■□□ 2.39
RTN4R-201ENST00000043402 ATP2B4P23634 1241 aa29.98■■■□□ 2.39
RTN4R-201ENST00000043402 GSTO1P78417 241 aa29.98■■■□□ 2.39
RTN4R-201ENST00000043402 ZRSR1Q15695 479 aaKnown RBP29.98■■■□□ 2.39
RTN4R-201ENST00000043402 KRT27Q7Z3Y8 459 aa29.98■■■□□ 2.39
RTN4R-201ENST00000043402 PROM2Q8N271 834 aa29.98■■■□□ 2.39
RTN4R-201ENST00000043402 BPIFA3Q9BQP9 254 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 251.7 ms