RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Gucy2cQ3UWA6 1072 aa15.41■□□□□ 0.06
Clcn4-203ENSMUST00000210061 C87499Q3UX49 493 aa15.41■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Mrps31Q61733 384 aaKnown RBP15.41■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Cyp7a1Q64505 503 aa15.41■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Tcp11l2Q8K1H7 517 aa15.41■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Thap2Q9D305 217 aa15.41■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Tube1Q9D6T1 475 aa15.41■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Shank3Q4ACU6 1730 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 CluhQ5SW19 1315 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Usp5P56399 858 aaKnown RBP15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 ItpripQ3TNL8 555 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Jakmip3Q5DTN8 844 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Rbm12b2Q66JV4 834 aaKnown RBP15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Ccdc57Q6PHN1 1016 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Tubb2aQ7TMM9 445 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Tubb2bQ9CWF2 445 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Plekho1Q9JIY0 408 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Hip1rQ9JKY5 1068 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Greb1lB9EJV3 1913 aa15.4■□□□□ 0.06
Clcn4-203ENSMUST00000210061 Krt24A1L317 512 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Speer4dL7N216 212 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Gnat2P50149 354 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Q3TYL0 343 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 CtcfQ61164 736 aaKnown RBP15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Pram1Q6BCL1 675 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Snd1Q78PY7 910 aaKnown RBP15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Cep85Q8BMK0 761 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Rasal3Q8C2K5 1041 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Rrp1bQ91YK2 724 aaKnown RBP15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 FliiQ9JJ28 1271 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Foxo4Q9WVH3 505 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Col18a1P39061 1774 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Myh7bA2AQP0 1941 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 FAM186AQ9D9R9 1790 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 4932429P05RikA2ADI4 785 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Cyp3a25O09158 503 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Hpcal4Q8BGZ1 191 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Caps2Q8BUG5 550 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Epc1Q8C9X6 813 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Uap1Q91YN5 522 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Pold4Q9CWP8 107 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Nav1Q8CH77 1875 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Pard3Q99NH2 1333 aa15.39■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Cyp2j7A0A140T8U1 504 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Dennd3A2RT67 1274 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Pde11aP0C1Q2 933 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Tnni2P13412 182 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 HdgfP51859 237 aaKnown RBP15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Cdr2P97817 455 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Rnf41Q8BH75 317 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Q8C1R3 189 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Card14Q99KF0 999 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Brms1Q99N20 246 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Ssc5dQ8BV57 1371 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 A0A1W2P6Q8 802 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Gm9048A0A1W2P7H4 802 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 A0A1W2P7S8 802 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 A0A1W2P7Z8 802 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Gm9046A0A1W2P855 802 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Tubb4bP68372 445 aaKnown RBP15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Olfr121Q5CZY0 321 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Cep112Q5PR68 954 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Sun3Q5SS91 320 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Cdc5lQ6A068 802 aaKnown RBP15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Tas2r124Q7M718 309 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Apol10aQ8CCA5 318 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Arhgef6Q8K4I3 771 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Smc1bQ920F6 1248 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Eif2ak3Q9Z2B5 1114 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Myh6Q02566 1938 aaKnown RBP15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 MetP16056 1379 aa15.38■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Scgb2b18A0A087WPA9 112 aa15.37■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Gm43738A0A0G2JEA5 862 aa15.37■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Ube3cQ80U95 1083 aa15.37■□□□□ 0.05
Clcn4-203ENSMUST00000210061 ApobrQ8VBT6 942 aa15.37■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Phlpp1Q8CHE4 1687 aa15.37■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Col20a1Q923P0 1320 aa15.37■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Wnt7aP24383 349 aa15.37■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Krt86P97861 486 aa15.37■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Zfand4D3Z3C6 739 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Sec23aQ01405 765 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Plekha7Q3UIL6 1118 aaKnown RBP15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Olfm5Q8BU90 496 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Ttc12Q8BW49 704 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Slx1bQ8BX32 270 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Zswim4Q8C7B8 1101 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Rbm28Q8CGC6 750 aaKnown RBP15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Hexim1Q8R409 356 aaKnown RBP15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Lrrc59Q922Q8 307 aaKnown RBP15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 NapgQ9CWZ7 312 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Efcc1Q9JJF6 558 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Egfl6Q9JJZ5 550 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Chaf1aQ9QWF0 911 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Cbx8Q9QXV1 362 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Uso1Q9Z1Z0 959 aaKnown RBP15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Atp8b1Q148W0 1251 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Ppp2r5bQ6PD28 497 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Nek5Q7TSC3 627 aa15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Ufl1Q8CCJ3 793 aaKnown RBP15.36■□□□□ 0.05
Clcn4-203ENSMUST00000210061 Gdap1l1Q8VE33 370 aa15.36■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms