RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Usp50Q6P8X6 390 aa12.47□□□□□ -0.41
Lig3-212ENSMUST00000173727 CerkQ8K4Q7 531 aa12.47□□□□□ -0.41
Lig3-212ENSMUST00000173727 Ltbp2O08999 1813 aa12.46□□□□□ -0.41
Lig3-212ENSMUST00000173727 NcapgE9PWG6 1004 aa12.46□□□□□ -0.41
Lig3-212ENSMUST00000173727 Eya3P97480 510 aa12.46□□□□□ -0.41
Lig3-212ENSMUST00000173727 Casc1Q6TDU8 730 aa12.46□□□□□ -0.41
Lig3-212ENSMUST00000173727 Plcd3Q8K2J0 785 aa12.46□□□□□ -0.41
Lig3-212ENSMUST00000173727 Taf1dQ9D4V4 322 aa12.46□□□□□ -0.41
Lig3-212ENSMUST00000173727 Znf287Q9EQB9 759 aa12.46□□□□□ -0.41
Lig3-212ENSMUST00000173727 Arid4aF8VPQ2 1261 aaKnown RBP12.46□□□□□ -0.42
Lig3-212ENSMUST00000173727 LrmpQ60664 539 aa12.46□□□□□ -0.42
Lig3-212ENSMUST00000173727 Ccp110Q7TSH4 1004 aa12.46□□□□□ -0.42
Lig3-212ENSMUST00000173727 Trmt2aQ8BNV1 574 aaKnown RBP12.46□□□□□ -0.42
Lig3-212ENSMUST00000173727 Ndufa8Q9DCJ5 172 aa12.46□□□□□ -0.42
Lig3-212ENSMUST00000173727 Lekr1B2RVN1 116 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Lnx1O70263 728 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Bach1P97302 739 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Gimap7Q8R379 293 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Ubac1Q8VDI7 409 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Glrx3Q9CQM9 337 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Sept14Q9DA97 430 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Pik3ap1Q9EQ32 811 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Stk39Q9Z1W9 556 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Ptpn12P35831 775 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 1700013D24RikQ0P521 120 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Wdr24Q8CFJ9 790 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Ccer1Q9CQL2 403 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Zbed3Q9D0L1 228 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Zmym2Q9CU65 1376 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Scg2Q03517 617 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Rc3h1Q4VGL6 1130 aaKnown RBP12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Lamc2Q61092 1191 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Triml1Q8BVP1 470 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Kdm4aQ8BW72 1064 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Klf15Q9EPW2 415 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Col5a2Q3U962 1497 aa12.45□□□□□ -0.42
Lig3-212ENSMUST00000173727 Peak1Q69Z38 1735 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 Cavin1O54724 392 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 Usp28Q5I043 1051 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 CbarpQ66L44 698 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 KhnynQ80U38 671 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 Lonrf3Q9D4H7 753 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 Ccng2O08918 344 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 Bicd2Q921C5 820 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 A0A1Y7VML8 143 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 Zscan18E9PUD6 809 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 Klrk1O54709 232 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 Cacnb3P54285 484 aa12.44□□□□□ -0.42
Lig3-212ENSMUST00000173727 A0A1W2P6Q8 802 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Gm9048A0A1W2P7H4 802 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 A0A1W2P7Z8 802 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Gm9046A0A1W2P855 802 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Ccdc112A0AUP1 442 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Usp5P56399 858 aaKnown RBP12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Klhdc9Q3USL1 350 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Zscan22Q8BGS5 496 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Yipf1Q91VU1 306 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Eif4enif1Q9EST3 983 aaKnown RBP12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Wdr78E9PYY5 807 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Tacc1Q6Y685 774 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Kcnj14Q8JZN3 434 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Zfp646Q6NV66 1788 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Fdx1P46656 188 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Pip5kl1Q6U7H8 395 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Mad2l2Q9D752 211 aa12.43□□□□□ -0.42
Lig3-212ENSMUST00000173727 Lbhd1A0A087WPA0 259 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 1700003F12RikA2AKE5 210 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Gm28047Q3US59 414 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Slc10a5Q5PT54 434 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Stk38Q91VJ4 465 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Prpf3Q922U1 683 aaKnown RBP12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Akap8Q9DBR0 687 aaKnown RBP12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Tmem47Q9JJG6 181 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 VirmaA2AIV2 1811 aaKnown RBP12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Kif3aP28741 701 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Slc27a1Q60714 646 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 CrebrfQ8CDG5 640 aaKnown RBP12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Spire2Q8K1S6 718 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Col4a3bpQ9EQG9 624 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Vcam1P29533 739 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Npr3P70180 536 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Vgll3P85442 326 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Anp32cQ64G17 123 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 PdcQ9QW08 244 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Clic4Q9QYB1 253 aa12.42□□□□□ -0.42
Lig3-212ENSMUST00000173727 Samd1D3YXK1 519 aa12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Psmd14O35593 310 aa12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Sec62Q8BU14 398 aaKnown RBP12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Rbm42Q91V81 474 aaKnown RBP12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Utp3Q9JI13 469 aaKnown RBP12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 U2af2P26369 475 aaKnown RBP12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Bach2P97303 839 aa12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 MyrflQ3UN70 904 aa12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Gm2163Q6PCY5 473 aa12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Dpp8Q80YA7 892 aa12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Ptgs1P22437 602 aa12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Alppl2P24823 529 aa12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Mcm3P25206 812 aaKnown RBP12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 Adcy5P84309 1262 aa12.41□□□□□ -0.42
Lig3-212ENSMUST00000173727 PsdQ5DTT2 1024 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms