RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Rpusd2Q149F1 553 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 PomkQ3TUA9 349 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 Fam117aQ7TNF9 451 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 KhnynQ80U38 671 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ppp1r11Q8K1L5 131 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 FliiQ9JJ28 1271 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 Igsf9bE9PZ19 1328 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 MyocO70624 490 aa9.85□□□□□ -0.83
Trim40-203ENSMUST00000172711 Pank1Q8K4K6 548 aa9.85□□□□□ -0.83
Trim40-203ENSMUST00000172711 IcoslgQ9JHJ8 322 aa9.85□□□□□ -0.83
Trim40-203ENSMUST00000172711 TnksQ6PFX9 1320 aa9.85□□□□□ -0.83
Trim40-203ENSMUST00000172711 Tox2A2A472 547 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Palm3A2TJV2 734 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ces1aE9PYP1 563 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Nck2O55033 380 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Morf4l1P60762 362 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Gas1Q01721 343 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Rnf157Q3TEL6 685 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Btg1-ps1Q3V0S2 161 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Btg1-ps2Q3V0X0 161 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Cyp24a1Q64441 514 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 GnptabQ69ZN6 1235 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Dcaf15Q6PFH3 600 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Fam160b2Q80YR2 744 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Trib2Q8K4K3 343 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Trex1Q91XB0 314 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ddx50Q99MJ9 734 aaKnown RBP9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 MthfsQ9D110 203 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Xrn2Q9DBR1 951 aaKnown RBP9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Acot3Q9QYR7 432 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Jbts17Q8CE72 3214 aa9.84□□□□□ -0.83
Trim40-203ENSMUST00000172711 Btnl4A2CG29 586 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Tmigd3G3X8R9 209 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Pnmal2G3X9N3 661 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 CtshP49935 333 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 GclcP97494 637 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Esyt2Q3TZZ7 845 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Vps54Q5SPW0 977 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Edrf1Q6GQV7 1239 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Zfp341Q6PGC9 846 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Adck5Q80V03 582 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Lmod1Q8BVA4 595 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Aldh1l2Q8K009 923 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 DcpsQ9DAR7 338 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 PcntP48725 2898 aa9.83□□□□□ -0.84
Trim40-203ENSMUST00000172711 Gm45233A0A0N4SVE0 221 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Wfdc16A2A5H4 111 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Slc6a20bO88575 635 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 DnttP09838 530 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Nf2P46662 596 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Cfap52Q5F201 620 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Brip1Q5SXJ3 1174 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Zfp90Q61967 636 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 ZyxQ62523 564 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Nme8Q715T0 586 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Nim1kQ8BHI9 436 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Pof1bQ8K4L4 587 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Syt17Q920M7 470 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Riok1Q922Q2 567 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Ube3bQ9ES34 1070 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Klrc1Q9Z202 244 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Lamb1P02469 1786 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Myh7Q91Z83 1935 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Pramef17A2ASJ1 475 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Cspp1B2RX88 1205 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Cyp3a57D3YYZ0 503 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Gjd2O54851 321 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Qrich1Q3UA37 777 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Defa-rs10Q64263 91 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Tmem266Q8BZB3 538 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Slc26a8Q8R0C3 999 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Apbb1ipQ8R5A3 670 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Gpsm2Q8VDU0 679 aa9.82□□□□□ -0.84
Trim40-203ENSMUST00000172711 Pnpla6Q3TRM4 1355 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Gon4lQ9DB00 2260 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Nlrc5C3VPR6 1915 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Bnip3O55003 187 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Mmp8O70138 465 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Cyp2c39P56656 490 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Atp9bP98195 1146 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Csf2raQ00941 388 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Exoc8Q6PGF7 716 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Ctu1Q99J10 420 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Pla2g12bQ99P27 195 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Fsip1Q9D3V5 435 aa9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Rai14Q9EP71 979 aaKnown RBP9.81□□□□□ -0.84
Trim40-203ENSMUST00000172711 Piezo1E2JF22 2547 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 RptorQ8K4Q0 1335 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 Il7P10168 154 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 Fscn2Q32M02 492 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 Znf710Q3U288 666 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 Nol8Q3UHX0 1147 aaKnown RBP9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 Krt25Q8VCW2 446 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 IrgqQ8VIM9 583 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 Smc1bQ920F6 1248 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 Alpk1Q9CXB8 1231 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 Dock2Q8C3J5 1828 aa9.8□□□□□ -0.84
Trim40-203ENSMUST00000172711 Znf638Q61464 1960 aaKnown RBP9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Tm6sf1P58749 370 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Fam178bQ24JP3 464 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms