RNA–Protein interactions for RNA: ENSMUST00000163559.7

Ccr9-202, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-202ENSMUST00000163559 Olfr119Q7TRJ5 321 aa17.62■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Rnf41Q8BH75 317 aa17.62■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Srp68Q8BMA6 625 aaKnown RBP17.62■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Caps2Q8BUG5 550 aa17.62■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Ankrd63A2ARS0 390 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Prl7d1P04769 244 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Slurp2P0DP59 97 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 SsbP32067 415 aaKnown RBP17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Smarcc1P97496 1104 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 SelenooQ9DBC0 667 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Tulp1Q9Z273 543 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Izumo3A6PWV3 263 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Gucy1a2F8VQK3 730 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Gm21969J3QJZ1 289 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Gnat2P50149 354 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Sf3b2Q3UJB0 878 aaKnown RBP17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Madcam1Q61826 405 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Ppp2r2cQ8BG02 447 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Smc2Q8CG48 1191 aaKnown RBP17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Paf1Q8K2T8 535 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 MlphQ91V27 590 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Ddx41Q91VN6 622 aaKnown RBP17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Sec23aQ01405 765 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Mum1l1Q4VA55 681 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Abcf1Q6P542 837 aaKnown RBP17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Asnsd1Q8BFS9 627 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Znf526Q8BI66 675 aa17.61■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Sipa1l3G3X9J0 1776 aa17.6■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Znfx1Q8R151 1909 aaKnown RBP17.6■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Wdr3Q8BHB4 942 aaKnown RBP17.6■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Pnpla2Q8BJ56 486 aa17.6■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Pde5aQ8CG03 865 aa17.6■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Tob2Q9JM55 345 aa17.6■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Serpinb6bO08804 377 aa17.6■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Bcl2l12Q9D3J3 255 aa17.6■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Ankrd31A0A140LI88 1765 aa17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Myh7bA2AQP0 1941 aa17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Ctr9Q62018 1173 aaKnown RBP17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Sh3bp5lQ99LH9 392 aa17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Thap2Q9D305 217 aa17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Snai1Q02085 264 aa17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Slc7a1Q09143 622 aa17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Aak1Q3UHJ0 959 aa17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 HlfQ8BW74 295 aa17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Zkscan5Q9Z1D8 819 aa17.59■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Acad12D3Z7X0 555 aa17.58■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Tuft1O08970 390 aa17.58■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Cyp3a25O09158 503 aa17.58■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Specc1lQ2KN98 1118 aaKnown RBP17.58■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Epha10Q8BYG9 1007 aa17.58■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Mis18aQ9CZJ6 204 aa17.58■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Foxo3Q9WVH4 672 aa17.58■□□□□ 0.41
Ccr9-202ENSMUST00000163559 Atp1b3P97370 278 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 QarsQ8BML9 775 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 VmacQ8BP01 174 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Ginm1Q91WR6 327 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Dynll2Q9D0M5 89 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Nek3Q9R0A5 511 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Arap2Q8BZ05 1703 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Casz1Q9CWL2 1761 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Greb1lB9EJV3 1913 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Tgs1Q923W1 853 aa17.58■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Lrp6O88572 1613 aa17.57■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Myh6Q02566 1938 aaKnown RBP17.57■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Ms4a1P19437 291 aa17.57■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Qtrt2B8ZXI1 415 aa17.57■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Lrrc15Q80X72 579 aa17.57■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Fam76aQ922G2 307 aa17.57■□□□□ 0.4
Ccr9-202ENSMUST00000163559 RarsQ9D0I9 660 aaKnown RBP17.57■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Cxcl11Q9JHH5 100 aa17.57■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Znf638Q61464 1960 aaKnown RBP17.57■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Ugt1a8D3Z748 530 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Ugt1a10E9PXN7 530 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Ube4aE9Q735 1028 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Mns1Q61884 491 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Krt40Q6IFX3 439 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Fchsd1Q6PFY1 688 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Sox30Q8CGW4 782 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Slc14a2Q8R4T9 930 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Dnajc14Q921R4 703 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Gimap8Q75N62 688 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Spag5Q7TME2 1165 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Zswim4Q8C7B8 1101 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Brd3Q8K2F0 726 aaKnown RBP17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Lonp2Q9DBN5 852 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Gm13023A2A8N2 498 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 MarcksP26645 309 aaKnown RBP17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Rhbdl3P58873 404 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 PsdQ5DTT2 1024 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Ift88Q61371 824 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Tc2nQ91XT6 489 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 ChmQ9QXG2 665 aa17.56■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Lama4P97927 1816 aa17.55■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Stag2O35638 1231 aa17.55■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Adssl1P28650 457 aa17.55■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Myl6bQ8CI43 207 aa17.55■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Ccdc12Q8R344 166 aaKnown RBP17.55■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Sgpp1Q9JI99 430 aa17.55■□□□□ 0.4
Ccr9-202ENSMUST00000163559 Palm3A2TJV2 734 aa17.55■□□□□ 0.4
Ccr9-202ENSMUST00000163559 RragbQ6NTA4 374 aa17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms