RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Tmod4Q9JLH8 345 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Pkp1P97350 728 aaKnown RBP12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Stxbp3Q60770 592 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 ClasrpQ8CFC7 668 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Cd2bp2Q9CWK3 342 aaKnown RBP12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Cst12Q9DAN8 128 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ints8Q80V86 995 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 HhatQ8BMT9 499 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Naa30Q8CES0 364 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Vmn1r199Q8R280 367 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Osbpl5Q9ER64 874 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Usp19Q3UJD6 1360 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Fyb2A2A995 729 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Zscan18E9PUD6 809 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Gtpbp6Q3U6U5 514 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Dmrtc1Q9D9R7 182 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Lonp2Q9DBN5 852 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Hecw1Q8K4P8 1604 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Specc1lQ2KN98 1118 aaKnown RBP12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 KaznQ69ZS8 779 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ccdc91Q9D8L5 442 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Med23Q80YQ2 1367 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Speer2E9Q9U2 264 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Clul1Q3ZRW6 464 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ugt1a5B2RT14 529 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 1700006A11RikB9EHI3 544 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Krit1Q6S5J6 736 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Sept7O55131 436 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Q8BZJ8 459 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Bbs5Q9CZQ9 341 aa12.31□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Plekhg1F6S200 1446 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Cbfa2t2O70374 594 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ptgs1P22437 602 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Iqsec3Q3TES0 1195 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ctnna3Q65CL1 895 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Lrrc59Q922Q8 307 aaKnown RBP12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Art2aP17981 287 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Aimp1P31230 310 aaKnown RBP12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Mtx1P47802 317 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Pcif1P59114 706 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Cct6aP80317 531 aaKnown RBP12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Unc5clQ6R653 518 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 RgmbQ7TQ33 436 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Foxp4Q9DBY0 795 aaKnown RBP12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Glt1d1A4FUP9 346 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Tsga10Q6NY15 697 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 CnstQ8CBC4 711 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ssx2ipQ8VC66 615 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Six6os1Q9CTN5 574 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Knl1Q66JQ7 1612 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Prdm2A2A7B5 1709 aaKnown RBP12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Kiaa1107Q80TK0 1369 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Atp2a2O55143 1044 aaKnown RBP12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Sec63Q8VHE0 760 aaKnown RBP12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Yeats2Q3TUF7 1407 aa12.3□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Asap2Q7SIG6 958 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Bbs9Q811G0 885 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ivns1abpQ920Q8 642 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Mcur1Q9CXD6 340 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Tacc3Q9JJ11 631 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Clic4Q9QYB1 253 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Mcm5P49718 733 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Pfkfb1P70266 471 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Zfp781Q0P5U5 243 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Fmnl3Q6ZPF4 1028 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Slc7a6osQ7TPE5 306 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Gimap7Q8R379 293 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Atp1a4Q9WV27 1032 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Dync1i1O88485 628 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ppp2r5bQ6PD28 497 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Maip1Q8BHE8 291 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Tubgcp2Q921G8 905 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Acsl3Q9CZW4 720 aaKnown RBP12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ube3bQ9ES34 1070 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Kif2aP28740 705 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 NfkbibQ60778 359 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Pnpla2Q8BJ56 486 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Arhgap23Q69ZH9 1483 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ccdc6D3YZP9 469 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Tubb4bP68372 445 aaKnown RBP12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ncoa4Q5U4H9 625 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 DohhA0A1Y7VJ29 135 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ttll7A4Q9F0 912 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ddx23D3Z0M9 819 aaKnown RBP12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Lipo1J3QME6 396 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Psmc2P46471 433 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 S100bP50114 92 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 XpcP51612 930 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Cfap100Q80VN0 613 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Cplx4Q80WM3 160 aa12.29□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Gas7Q60780 421 aa12.28□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Znf830Q8R1N0 363 aaKnown RBP12.28□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Pard3Q99NH2 1333 aa12.28□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Fdx1P46656 188 aa12.28□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ccdc174Q3U155 467 aa12.28□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Tor4aQ8BH02 426 aa12.28□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Dpp7Q9ET22 506 aa12.28□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Zscan25B2RX31 543 aa12.28□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Spata16Q8C636 571 aa12.28□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Eftud2O08810 971 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms