RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Taco1Q8K0Z7 294 aaKnown RBP15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Tubgcp2Q921G8 905 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ppp2r3dQ9Z176 491 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ncoa3O09000 1398 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Zscan18E9PUD6 809 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Cops6O88545 324 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Etf1Q8BWY3 437 aaKnown RBP15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Prl3d2F6R3P9 224 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Slc12a2P55012 1205 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Tm6sf1P58749 370 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Itga6Q61739 1091 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Mtss1lQ6P9S0 715 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ano8Q6PB70 1060 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 TsksO54887 585 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Morc4Q8BMD7 928 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Rcn2Q8BP92 320 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Apol10aQ8CCA5 318 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Nod2Q8K3Z0 1020 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ift81O35594 676 aa15.46■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Samsn1P57725 372 aa15.46■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ifit1Q64282 463 aa15.46■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Prune1Q8BIW1 454 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Riok3Q9DBU3 519 aaKnown RBP15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 MycbpQ9EQS3 103 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Myl7Q9QVP4 175 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Eif6O55135 245 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Surf6P70279 355 aaKnown RBP15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 MaeaQ4VC33 396 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Cdcp1Q5U462 833 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Tor4aQ8BH02 426 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Gbp5Q8CFB4 590 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Bst2Q8R2Q8 172 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Trpc3Q9QZC1 836 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Atp10dQ8K2X1 1416 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Trip13Q3UA06 432 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Slc10a4Q3UEZ8 437 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Lrrc43Q3V0L5 667 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ctnna3Q65CL1 895 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 C130026I21RikQ8C898 291 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 CactinQ9CS00 772 aaKnown RBP15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Astn2Q80Z10 1352 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Gm28043E0CXC2 719 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Gna15P30678 374 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Iws1Q8C1D8 766 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Kcnk13Q8R1P5 405 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Pcdhb5Q91XZ5 792 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ophn1Q99J31 802 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 LpxnQ99N69 386 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 SyncQ9EPM5 470 aa15.45■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Zfp597E9Q6S0 419 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 WizO88286 1684 aaKnown RBP15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Krt90E9Q1Z0 538 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ighmbp2P40694 993 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 ClgnP52194 611 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 GopcQ8BH60 463 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Slc39a6Q8C145 765 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Cep57Q8CEE0 500 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ncapd2Q8K2Z4 1392 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Mug2P28666 1451 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ccdc174Q3U155 467 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Vps37bQ8R0J7 285 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Snapc4Q8BP86 1333 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Gm5168Q4KL04 211 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 PsdQ5DTT2 1024 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ptpn14Q62130 1189 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Haus6Q6NV99 933 aaKnown RBP15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Slc7a6osQ7TPE5 306 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Cnksr2Q80YA9 1032 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 ThemisQ8BGW0 636 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Wdr24Q8CFJ9 790 aa15.44■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ccdc175E9PVB3 822 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 AdkP55264 361 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Fam207aP58468 219 aaKnown RBP15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Samd9lQ69Z37 1561 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Rab11fip4Q8BQP8 635 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Fam133bQ9CVI2 245 aaKnown RBP15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Galnt15Q9D2N8 638 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Erich2E9Q1A6 463 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ano9P86044 747 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Trim21Q62191 470 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Camsap3Q80VC9 1252 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ttc27Q8CD92 847 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Trappc8E9PWG2 1437 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Kdm5bQ80Y84 1544 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Card6E9PWH2 1175 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Slc27a3O88561 667 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ets1P27577 440 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Wdr44Q6NVE8 915 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Efcab8Q8C9R9 203 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Stag1Q9D3E6 1258 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Klhl40Q9D783 621 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Bpifb4A2BGH0 617 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Q3TYL0 343 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Ppp1r7Q3UM45 361 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Tbc1d9bQ5SVR0 1263 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Serpinb13Q8CDC0 389 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Cd2bp2Q9CWK3 342 aaKnown RBP15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Cst12Q9DAN8 128 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Stx12Q9ER00 274 aa15.43■□□□□ 0.06
Col3a1-201ENSMUST00000087883 Azi2Q9QYP6 405 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms