RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ube3bQ9ES34 1070 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ercc4Q9QZD4 917 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Stk39Q9Z1W9 556 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Otud7bB2RUR8 840 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Sept1P42209 366 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Epc1Q8C9X6 813 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ybx3Q9JKB3 361 aaKnown RBP11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Hic2Q9JLZ6 619 aaKnown RBP11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Exoc3l2D3YUP5 789 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Dpf2Q61103 391 aaKnown RBP11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Myl6bQ8CI43 207 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cd209bQ8CJ91 325 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 BaatQ91X34 420 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Mroh6V9GX81 722 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 1700029H14RikE9PY36 240 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Phldb3E9QAF4 648 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Pla2g4bP0C871 782 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Plcb3P51432 1234 aaKnown RBP11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Znf771Q8BJ90 317 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 LarsQ8BMJ2 1178 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Caps2Q8BUG5 550 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Pcdha7Q91Y13 937 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Dctpp1Q9QY93 170 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Vnn1Q9Z0K8 512 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Nfil3O08750 462 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ranbp1P34022 203 aaKnown RBP11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Dynll1P63168 89 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cct6aP80317 531 aaKnown RBP11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Erich4Q3UNU4 136 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 PsdQ5DTT2 1024 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cep128Q8BI22 1102 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ginm1Q91WR6 327 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Tmem132aQ922P8 1018 aa11□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Med23Q80YQ2 1367 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 A0A1W2P6Q8 802 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Gm9048A0A1W2P7H4 802 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 A0A1W2P7S8 802 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 A0A1W2P7Z8 802 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Gm9046A0A1W2P855 802 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cyp3a59D3Z2W7 503 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Enc1O35709 589 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cdc5lQ6A068 802 aaKnown RBP10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Gm4340L7N2C4 268 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Sycp1Q62209 993 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Apol10aQ8CCA5 318 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Q8CEZ4 452 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ccdc96Q9CR92 584 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Zcchc17Q9ESX4 241 aaKnown RBP10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Tns2Q8CGB6 1400 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cyp2d9P11714 504 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cep63Q3UPP8 700 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ccdc122Q8BVN0 290 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Exoc1Q8R3S6 894 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Tubb4aQ9D6F9 444 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cnpy3Q9DAU1 276 aa10.99□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ccng2O08918 344 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Gnat2P50149 354 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Fam83bQ0VBM2 1012 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Rtel1Q0VGM9 1203 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 DlatQ8BMF4 642 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Tcp11l2Q8K1H7 517 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Krtap5-3Q9D226 196 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Arpp21Q9DCB4 807 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Vstm4T1NXB5 319 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Rgs12Q8CGE9 1381 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Setdb1O88974 1307 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Zfpm1O35615 995 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Epha2Q03145 977 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Asic1Q6NXK8 526 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ankrd23Q812A3 306 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Sgsm1Q8BPQ7 1093 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Gdap1l1Q8VE33 370 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Pcdha12Q91Y18 950 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Etnk1Q9D4V0 363 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Lcmt1A0A0U1RNF2 332 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cdc27A2A6Q5 825 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Apol7aB2RT54 418 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Gm7347D3YYI9 267 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Speer4aF8VPX6 267 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Sema6bO54951 886 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Tbc1d2bQ3U0J8 965 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Arhgef2Q60875 985 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cyp7b1Q60991 507 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 UvssaQ9D479 717 aa10.98□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Zfp597E9Q6S0 419 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Epb41l2O70318 988 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Il7P10168 154 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Usp5P56399 858 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Top1Q04750 767 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ssrp1Q08943 708 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ces3aQ63880 571 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 NelfbQ8C4Y3 580 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 MypopQ8R4U1 393 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ces3bQ8VCU1 571 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 SetQ9EQU5 289 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 FliiQ9JJ28 1271 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Uso1Q9Z1Z0 959 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Usp53P15975 1069 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Rad23aP54726 363 aa10.97□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cyp4x1Q6A152 507 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms