RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Ttll4Q80UG8 1193 aa10.6□□□□□ -0.71
Usp28-201ENSMUST00000047349 Fam13bQ8K2H3 851 aa10.6□□□□□ -0.71
Usp28-201ENSMUST00000047349 Slc5a4bQ91ZP4 660 aa10.6□□□□□ -0.71
Usp28-201ENSMUST00000047349 Sh3bp5lQ99LH9 392 aa10.6□□□□□ -0.71
Usp28-201ENSMUST00000047349 Bap1Q99PU7 728 aa10.6□□□□□ -0.71
Usp28-201ENSMUST00000047349 RarsQ9D0I9 660 aaKnown RBP10.6□□□□□ -0.71
Usp28-201ENSMUST00000047349 Vnn1Q9Z0K8 512 aa10.6□□□□□ -0.71
Usp28-201ENSMUST00000047349 Fer1l6E0CZ42 1862 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Siah1aP61092 282 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Esyt2Q3TZZ7 845 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Otop3Q80UF9 577 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Ctdspl2Q8BG15 465 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Anks1bQ8BIZ1 1259 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Mrpl12Q9DB15 201 aaKnown RBP10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 AfdnQ9QZQ1 1820 aaKnown RBP10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Cyb5rlB1AS42 316 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Nbr1P97432 988 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Fam89aQ14BJ1 175 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Gimap7Q8R379 293 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 RtcbQ99LF4 505 aaKnown RBP10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Mrps25Q9D125 171 aaKnown RBP10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Clstn1Q9EPL2 979 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Rbm6S4R1W5 1118 aaKnown RBP10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Plch1Q4KWH5 1682 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Znf609Q8BZ47 1413 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Specc1lQ2KN98 1118 aaKnown RBP10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Kiaa0319lQ8K135 1048 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Nup133Q8R0G9 1155 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Vps33aQ9D2N9 598 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Cbx6Q9DBY5 414 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Popdc2Q9ES82 367 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Heg1E9Q7X6 1337 aa10.59□□□□□ -0.71
Usp28-201ENSMUST00000047349 Pnpla6Q3TRM4 1355 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Spata5Q3UMC0 893 aaKnown RBP10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Cyp4x1Q6A152 507 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Ankk1Q8BZ25 745 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Gm13023A2A8N2 498 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Plekha7Q3UIL6 1118 aaKnown RBP10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 LrmpQ60664 539 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Glis3Q6XP49 780 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Larp6Q8BN59 492 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Tgs1Q923W1 853 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Elf2Q9JHC9 593 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Tob2Q9JM55 345 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Myh6Q02566 1938 aaKnown RBP10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Card6E9PWH2 1175 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Tdo2P48776 406 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Ddx27Q921N6 760 aaKnown RBP10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Uchl5Q9WUP7 329 aa10.58□□□□□ -0.72
Usp28-201ENSMUST00000047349 Eif5P59325 429 aaKnown RBP10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 MycbpapQ5SUV2 932 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Rbm26Q6NZN0 1012 aaKnown RBP10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Etf1Q8BWY3 437 aaKnown RBP10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 SelenooQ9DBC0 667 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Phrf1A6H619 1682 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Nhsl1Q8CAF4 1587 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Atp8b5A3FIN4 1183 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Tbc1d2B1AVH7 922 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Tnnt2P50752 301 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Hdac4Q6NZM9 1076 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Adck5Q80V03 582 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 CerkQ8K4Q7 531 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 MlphQ91V27 590 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Etnk1Q9D4V0 363 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 GdaQ9R111 454 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Map3k15A2AQW0 1331 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Nup98Q6PFD9 1816 aaKnown RBP10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Cacna1sQ02789 1880 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 A0A1Y7VML8 143 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Calcoco2A2A6M5 331 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Phldb3E9QAF4 648 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Stx8O88983 236 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Adssl1P28650 457 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Krt39Q6IFX4 482 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Tekt3Q6X6Z7 490 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Spag5Q7TME2 1165 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Frmd3Q8BHD4 595 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Gtf3c5Q8R2T8 520 aa10.57□□□□□ -0.72
Usp28-201ENSMUST00000047349 Pfkfb3A7UAK5 555 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Sema3fO88632 785 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Nek1P51954 1203 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Asnsd1Q8BFS9 627 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Afg3l2Q8JZQ2 802 aaKnown RBP10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Znf287Q9EQB9 759 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Duox1A2AQ92 1551 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Tex13cD3YU32 604 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Celf1P28659 486 aaKnown RBP10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Grin1P35438 938 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Irf5P56477 497 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Ap5z1Q3U829 807 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Cdcp1Q5U462 833 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Fbxo2Q80UW2 297 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Mei4Q8BRM6 389 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Fermt2Q8CIB5 680 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Phldb2Q8K1N2 1249 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Lzts2Q91YU6 671 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Gpaa1Q9WTK3 621 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Scg2Q03517 617 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Ccdc102aQ3TMW1 549 aa10.56□□□□□ -0.72
Usp28-201ENSMUST00000047349 Ell2Q3UKU1 639 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms