RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Nucb1Q02819 459 aaKnown RBP15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Nrbf2Q8VCQ3 287 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Ppp2r3dQ9Z176 491 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Kif6E9PX57 802 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Myl3P09542 204 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 FanccP50652 591 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Rexo1Q7TT28 1213 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Dmrt2Q8BG36 561 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Amotl2Q8K371 772 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Rhobtb1Q9DAK3 695 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Cd274Q9EP73 290 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gucy2eP52785 1108 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Pola1P33609 1465 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Arhgef12Q8R4H2 1543 aaKnown RBP15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Rrbp1Q99PL5 1605 aaKnown RBP15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Zap70P43404 618 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Uspl1Q3ULM6 1089 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Fbxo41Q6NS60 873 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Usp8Q80U87 1080 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 LgsnQ8CIX8 563 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 MycbpapQ5SUV2 932 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Terf1P70371 421 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Wdr44Q6NVE8 915 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Acnat2Q8BGG9 420 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Lmbr1lQ9D1E5 489 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 C1qbpO35658 278 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Fbxo3Q9DC63 480 aa15.38■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Ppp2r5eQ61151 467 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Tbc1d4Q8BYJ6 1307 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Shroom2A2ALU4 1481 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Glg1Q61543 1175 aaKnown RBP15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Ccdc50Q810U5 305 aaKnown RBP15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Ccdc68Q8BVC4 333 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Trim60Q8VI40 466 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Polr2dQ9D7M8 142 aaKnown RBP15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Fmnl1Q9JL26 1094 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Lrrc43Q3V0L5 667 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Ctnna3Q65CL1 895 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Fam213aQ9CYH2 218 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Erich3F6QRE9 1637 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Neo1P97798 1493 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Pdzd8B9EJ80 1147 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gadd45bP22339 160 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Tti2Q8BGV4 512 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Cdk5rap3Q99LM2 503 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Spata17Q9D552 379 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Scyl1Q9EQC5 806 aaKnown RBP15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Tekt3Q6X6Z7 490 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Mtrf1lQ8BJU9 373 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 P3h4Q8K2B0 443 aa15.37■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Stk10O55098 966 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Wbp11Q923D5 641 aaKnown RBP15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Thoc2B1AZI6 1594 aaKnown RBP15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Lmo7E9PYF4 1699 aaKnown RBP15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Xbp1O35426 267 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 GckrQ91X44 587 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Tpcn1Q9EQJ0 817 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Rrp1P56183 494 aaKnown RBP15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Arhgap42B2RQE8 841 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gucy1b3O54865 620 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Kif22Q3V300 660 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Trim21Q62191 470 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Myl6bQ8CI43 207 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Cd72P21855 354 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Acsbg1Q99PU5 721 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Efcab2Q9CQ46 164 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Mast3Q3U214 1321 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Nup58Q8R332 587 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Acot11Q8VHQ9 594 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Trim42Q9D2H5 723 aa15.36■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Lonrf2B2RT44 518 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Prim1P20664 417 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Arhgef1Q61210 920 aaKnown RBP15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Kif1bpQ6ZPU9 617 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Kcnh3Q9WVJ0 1095 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gucy2fQ5SDA5 1108 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Pdzrn3Q69ZS0 1063 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Efcab14Q8BGQ6 484 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Ptcd1Q8C2E4 695 aaKnown RBP15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Armc3A2AU72 881 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Slc5a4bQ91ZP4 660 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Ppp1r12bQ8BG95 976 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Ccdc189Q6NZQ0 333 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Kiaa1024Q8K3V7 917 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Zbtb12Q9Z150 459 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Irx1P81068 480 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Pde5aQ8CG03 865 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Lrrc8cQ8R502 803 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Paip2bQ91W45 136 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Med10Q9CXU0 135 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Utp11Q9CZJ1 253 aaKnown RBP15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Dnajc25A2ALW5 357 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gm5936A2BG95 728 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Gm5640A3KG49 728 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Cct6aP80317 531 aaKnown RBP15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Ccdc33Q3ULW6 985 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Daam2Q80U19 1115 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Pdcd7Q9WTY1 482 aa15.35■□□□□ 0.05
Col5a1-201ENSMUST00000028280 TprnA2AI08 749 aaKnown RBP15.34■□□□□ 0.05
Col5a1-201ENSMUST00000028280 Krt14Q61781 484 aa15.34■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms