RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Atp8b2P98199 1209 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Fam47cQ14BE7 430 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Fam170aQ66LM6 333 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 PrimpolQ6P1E7 537 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Kiaa0319lQ8K135 1048 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Large2Q5XPT3 690 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Micall1Q8BGT6 870 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Rnaseh2aQ9CWY8 301 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Nfil3O08750 462 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Nucks1Q80XU3 234 aaKnown RBP9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Gemin5Q8BX17 1502 aaKnown RBP9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Prl3d2F6R3P9 224 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Tnni3P48787 211 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Tsga10Q6NY15 697 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Anapc5Q8BTZ4 740 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Iws1Q8C1D8 766 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Csrnp1P59054 583 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 B4galnt4Q766D5 1034 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ano1Q8BHY3 960 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ppfia2Q8BSS9 1257 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Cep83Q9D5R3 692 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Cdk12Q14AX6 1484 aaKnown RBP9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Col20a1Q923P0 1320 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Q8C6G1 249 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 CenppQ9CZ92 286 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Akap12Q9WTQ5 1684 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Kif2aP28740 705 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Rps8P62242 208 aaKnown RBP9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Capza3P70190 299 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Rtel1Q0VGM9 1203 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Mphosph8Q3TYA6 858 aaKnown RBP9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Zbtb1Q91VL9 713 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Syde2E9PUP1 1314 aa9.17□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Slc12a2P55012 1205 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Aldh8a1Q8BH00 487 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 BlvraQ9CY64 295 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Kcnh4A2A5F7 1018 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Eef1dP57776 281 aaKnown RBP9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Adam1aQ60813 791 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Pram1Q6BCL1 675 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Slc17a8Q8BFU8 601 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Rps6ka2Q9WUT3 733 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Simc1E9Q6E9 1354 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 TnksQ6PFX9 1320 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Kif22Q3V300 660 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Parp10Q8CIE4 960 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Asic2Q925H0 512 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Plcb1Q9Z1B3 1216 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 1700029H14RikE9PY36 240 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Clasp2Q8BRT1 1286 aaKnown RBP9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Mettl24Q8CCB5 363 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Strn3Q9ERG2 796 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ccnt1Q9QWV9 724 aaKnown RBP9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ankrd50F7BE84 1390 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Pde1bQ01065 535 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Pja2Q80U04 707 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Tut1Q8R3F9 869 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Kidins220E9Q9B7 1793 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Cfap70D3YVL2 1141 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Heatr4E9Q357 955 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Pabpn1lQ5XFR0 273 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Arhgef2Q60875 985 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Tshz3Q8CGV9 1081 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Mylk2Q8VCR8 613 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 TprnA2AI08 749 aaKnown RBP9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Magea1O89006 320 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Magea5O89009 320 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Tyro3P55144 880 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Agbl1Q09M05 972 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Znf526Q8BI66 675 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Zkscan8Q8BSL0 588 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 H2-OaQ9QWV1 250 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Magea2Q9R2A2 320 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Nkx1-2P42580 305 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 XpcP51612 930 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Clcn1Q64347 994 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Rsad2Q8CBB9 362 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Rufy3Q9D394 469 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Abcc12Q80WJ6 1366 aa9.16□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Cnksr1A2A9K7 700 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Arhgef10lA2AWP8 1280 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Nedd9O35177 833 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 LifrP42703 1092 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Nub1P54729 614 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Tmtc1Q3UV71 942 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Galnt17Q7TT15 598 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Terf2ipQ91VL8 393 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 IqcdQ9D3V1 458 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Rsrc1Q9DBU6 334 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ccdc13D3YV10 709 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ddx31Q6NZQ2 687 aaKnown RBP9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Rimbp2Q80U40 1072 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Sdad1Q80UZ2 687 aaKnown RBP9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Zswim4Q8C7B8 1101 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Trim60Q8VI40 466 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Nxf1Q99JX7 618 aaKnown RBP9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Zbtb38Q3LR78 1197 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ccdc157Q5SPX1 718 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 PicalmQ7M6Y3 660 aaKnown RBP9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ccdc28aQ8CEI3 192 aa9.15□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms