RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Myl10Q62082 202 aa20.04■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Acap3Q6NXL5 833 aa20.04■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Leng8Q8CBY3 785 aaKnown RBP20.04■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Smc2Q8CG48 1191 aaKnown RBP20.04■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 LgsnQ8CIX8 563 aa20.04■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Phkg2Q9DB30 406 aa20.04■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Scgb2b18A0A087WPA9 112 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 4932429P05RikA2ADI4 785 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Enc1O35709 589 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Chrm1P12657 460 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Nap1l1P28656 391 aaKnown RBP20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Bbof1Q3V079 533 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Ttc12Q8BW49 704 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Znrd1-asQ8R0E5 213 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Srgap2Q91Z67 1071 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 4930550L24RikQ99PA7 320 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Sar1bQ9CQC9 198 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Psmd14O35593 310 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Ap1g2O88512 791 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Tpp1O89023 562 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Chp1P61022 195 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Smc4Q8CG47 1286 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Stard3nlQ9DCI3 235 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Lztfl1Q9JHQ5 299 aa20.03■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Gm5580A0A0N4SVP8 411 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Arhgap6O54834 987 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Eif3j1Q3UGC7 261 aaKnown RBP20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Irak1Q62406 710 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Eif3j2Q66JS6 263 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Rbm12b2Q66JV4 834 aaKnown RBP20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Lrrn2Q6PHP6 730 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Alx1Q8C8B0 326 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Vps53Q8CCB4 832 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Calcoco1Q8CGU1 691 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Tldc1Q8K0P3 455 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Tbc1d7Q9D0K0 293 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Cyp2j7A0A140T8U1 504 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Trim30cD3YVI9 513 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Wasf1Q8R5H6 559 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Ciao1Q99KN2 339 aa20.02■□□□□ 0.8
Sqstm1-201ENSMUST00000015981 Kif23E9Q5G3 953 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Hnrnph1O35737 449 aaKnown RBP20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Hnrnph2P70333 449 aaKnown RBP20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 IntuQ059U7 942 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Zrsr2Q62377 462 aaKnown RBP20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 ThemisQ8BGW0 636 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Dnajc5gQ8C632 165 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Msantd4Q91YU3 345 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Klc4Q9DBS5 619 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 SetQ9EQU5 289 aaKnown RBP20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Slc5a4aQ9ET37 656 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Surf6P70279 355 aaKnown RBP20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Gtf2f1Q3THK3 508 aaKnown RBP20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Ccdc33Q3ULW6 985 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Mis12Q9CY25 206 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Cwc25Q9DBF7 416 aa20.01■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Cyp2d9P11714 504 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 LtbrP50284 415 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Ppp1r1bQ60829 194 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Q8K2W9 541 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Txndc5Q91W90 417 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Dbndd2Q9CRD4 158 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Tmem39aQ9CYC3 486 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Col15a1O35206 1367 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Gli3Q61602 1583 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 TsksO54887 585 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Abcd1P48410 736 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Edrf1Q6GQV7 1239 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Ccdc186Q8C9S4 917 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Sirt2Q8VDQ8 389 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Med23Q80YQ2 1367 aa20■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Rab3il1Q8VDV3 383 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Gpr108Q91WD0 569 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Erlin1Q91X78 346 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 RpainQ9CWY9 219 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Etnk1Q9D4V0 363 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Pcdhb9E9Q5G2 828 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 E9QMW4 1145 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Ckap2Q3V1H1 664 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Ddx49Q4FZF3 480 aaKnown RBP19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Papd7Q6PB75 542 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 MtrrQ8C1A3 696 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Ncoa5Q91W39 579 aaKnown RBP19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Krt84Q99M73 603 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 KynuQ9CXF0 464 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Copb1Q9JIF7 953 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 CluhQ5SW19 1315 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Ankrd35E9Q9D8 996 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Stim2P83093 746 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Kiaa1468Q148V7 1216 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Smarca1Q6PGB8 1046 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Pabpc4Q6PHQ9 660 aaKnown RBP19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Rassf10Q8BL43 508 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Nop9Q8BMC4 636 aaKnown RBP19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Caps2Q8BUG5 550 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 AopepQ8BXQ6 817 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Lrrd1Q8C0R9 853 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Ano2Q8CFW1 1002 aa19.99■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Sun3Q5SS91 320 aa19.98■□□□□ 0.79
Sqstm1-201ENSMUST00000015981 Q8C5C9 218 aa19.98■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms