RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Krtap15-1Q9QZU5 150 aa6.28□□□□□ -1.4
Nup50-201ENSMUST00000165443 Col6a5A6H584 2640 aa6.27□□□□□ -1.41
Nup50-201ENSMUST00000165443 Itpr2Q9Z329 2701 aa6.27□□□□□ -1.41
Nup50-201ENSMUST00000165443 Gm9508A0A1W2P7W0 230 aa6.27□□□□□ -1.41
Nup50-201ENSMUST00000165443 Svep1A2AVA0 3567 aa6.26□□□□□ -1.41
Nup50-201ENSMUST00000165443 Pdzd2E9Q1M1 2796 aa6.26□□□□□ -1.41
Nup50-201ENSMUST00000165443 Romo1P60603 79 aa6.24□□□□□ -1.41
Nup50-201ENSMUST00000165443 Fam229aB2KGE5 128 aa6.24□□□□□ -1.41
Nup50-201ENSMUST00000165443 Gm5767A0A0J9YTU8 78 aa6.24□□□□□ -1.41
Nup50-201ENSMUST00000165443 Cmya5Q70KF4 3739 aa6.23□□□□□ -1.41
Nup50-201ENSMUST00000165443 Nbeal2Q6ZQA0 2742 aa6.22□□□□□ -1.41
Nup50-201ENSMUST00000165443 Gm2310J3QNJ2 377 aa6.22□□□□□ -1.41
Nup50-201ENSMUST00000165443 Hivep1Q03172 2688 aa6.22□□□□□ -1.41
Nup50-201ENSMUST00000165443 Camk2n1Q6QWF9 78 aa6.22□□□□□ -1.41
Nup50-201ENSMUST00000165443 Sec61bQ9CQS8 96 aaKnown RBP6.21□□□□□ -1.42
Nup50-201ENSMUST00000165443 Gm36176A0A1W2P8D5 158 aa6.19□□□□□ -1.42
Nup50-201ENSMUST00000165443 Igfn1Q3KNY0 2849 aa6.18□□□□□ -1.42
Nup50-201ENSMUST00000165443 BC029722A0A0N4SW31 51 aa6.17□□□□□ -1.42
Nup50-201ENSMUST00000165443 2310050C09RikG5E8Z3 280 aa6.17□□□□□ -1.42
Nup50-201ENSMUST00000165443 Tenm4Q3UHK6 2771 aa6.16□□□□□ -1.42
Nup50-201ENSMUST00000165443 Col7a1Q63870 2944 aa6.15□□□□□ -1.43
Nup50-201ENSMUST00000165443 Rps29P62274 56 aa6.14□□□□□ -1.43
Nup50-201ENSMUST00000165443 Gm10382Q3V0T5 144 aa6.14□□□□□ -1.43
Nup50-201ENSMUST00000165443 Tex15F8VPN2 2785 aa6.13□□□□□ -1.43
Nup50-201ENSMUST00000165443 Cox6b2Q80ZN9 88 aa6.12□□□□□ -1.43
Nup50-201ENSMUST00000165443 2310061N02RikQ9D6S9 174 aa6.11□□□□□ -1.43
Nup50-201ENSMUST00000165443 Ank2Q8C8R3 3898 aa6.1□□□□□ -1.43
Nup50-201ENSMUST00000165443 Krtap14O08640 167 aa6.09□□□□□ -1.43
Nup50-201ENSMUST00000165443 Krtap13O88375 197 aa6.09□□□□□ -1.43
Nup50-201ENSMUST00000165443 FcgbpE9Q0B5 2583 aa6.07□□□□□ -1.44
Nup50-201ENSMUST00000165443 Tnp2P11378 117 aa6.06□□□□□ -1.44
Nup50-201ENSMUST00000165443 Muc4Q8JZM8 3443 aa6.06□□□□□ -1.44
Nup50-201ENSMUST00000165443 Helz2E9QAM5 2947 aaKnown RBP6.05□□□□□ -1.44
Nup50-201ENSMUST00000165443 Gm19426M0QWC7 77 aa6.04□□□□□ -1.44
Nup50-201ENSMUST00000165443 Fbn1Q61554 2873 aaKnown RBP6.02□□□□□ -1.45
Nup50-201ENSMUST00000165443 LystP97412 3788 aa6.01□□□□□ -1.45
Nup50-201ENSMUST00000165443 Srrm2Q8BTI8 2703 aaKnown RBP6□□□□□ -1.45
Nup50-201ENSMUST00000165443 TgO08710 2766 aa5.99□□□□□ -1.45
Nup50-201ENSMUST00000165443 D6Ertd527eA0A0N4SWI3 464 aa5.96□□□□□ -1.46
Nup50-201ENSMUST00000165443 ApcQ61315 2845 aa5.95□□□□□ -1.46
Nup50-201ENSMUST00000165443 Gm9507D3Z5T3 223 aa5.93□□□□□ -1.46
Nup50-201ENSMUST00000165443 Tenm1Q9WTS4 2731 aa5.93□□□□□ -1.46
Nup50-201ENSMUST00000165443 Csmd2V9GX34 3611 aa5.91□□□□□ -1.46
Nup50-201ENSMUST00000165443 BsnO88737 3942 aa5.85□□□□□ -1.47
Nup50-201ENSMUST00000165443 Krtap10-4Q08EG8 221 aa5.84□□□□□ -1.48
Nup50-201ENSMUST00000165443 CubnQ9JLB4 3623 aa5.77□□□□□ -1.49
Nup50-201ENSMUST00000165443 Gm40193A0A1B0GT39 78 aa5.76□□□□□ -1.49
Nup50-201ENSMUST00000165443 Xirp2Q4U4S6 3784 aa5.76□□□□□ -1.49
Nup50-201ENSMUST00000165443 Krtap10-10A0A1W2P7T6 217 aa5.75□□□□□ -1.49
Nup50-201ENSMUST00000165443 Ndufaf8A2AMZ4 74 aa5.74□□□□□ -1.49
Nup50-201ENSMUST00000165443 Gm21887J3QQ04 176 aa5.72□□□□□ -1.49
Nup50-201ENSMUST00000165443 VwfQ8CIZ8 2813 aa5.68□□□□□ -1.5
Nup50-201ENSMUST00000165443 A930033H14RikG5E8X6 103 aa5.64□□□□□ -1.51
Nup50-201ENSMUST00000165443 Tnp1P10856 55 aa5.63□□□□□ -1.51
Nup50-201ENSMUST00000165443 Gm20537G3UYK7 97 aa5.63□□□□□ -1.51
Nup50-201ENSMUST00000165443 Gm2696A0A1W2P709 240 aa5.62□□□□□ -1.51
Nup50-201ENSMUST00000165443 Gm5965D3Z724 196 aa5.61□□□□□ -1.51
Nup50-201ENSMUST00000165443 Gm9112A2AI92 75 aa5.57□□□□□ -1.52
Nup50-201ENSMUST00000165443 2310079G19RikQ9D6L6 185 aa5.56□□□□□ -1.52
Nup50-201ENSMUST00000165443 Dnah14A0A140LIJ4 4489 aa5.53□□□□□ -1.52
Nup50-201ENSMUST00000165443 B930094E09RikQ8C4T2 136 aa5.53□□□□□ -1.52
Nup50-201ENSMUST00000165443 Gm17416Q30KP4 66 aa5.51□□□□□ -1.53
Nup50-201ENSMUST00000165443 Muc6Q80T03 2850 aa5.49□□□□□ -1.53
Nup50-201ENSMUST00000165443 Prm2P07978 107 aa5.47□□□□□ -1.53
Nup50-201ENSMUST00000165443 Megf8P60882 2789 aa5.46□□□□□ -1.54
Nup50-201ENSMUST00000165443 Tenm2Q9WTS5 2764 aa5.46□□□□□ -1.54
Nup50-201ENSMUST00000165443 Hspg2Q05793 3707 aaKnown RBP5.44□□□□□ -1.54
Nup50-201ENSMUST00000165443 2310057N15RikQ9D6T8 200 aa5.43□□□□□ -1.54
Nup50-201ENSMUST00000165443 Dnah10D3YYQ8 4591 aa5.43□□□□□ -1.54
Nup50-201ENSMUST00000165443 Gm9918Q8BUR5 174 aa5.42□□□□□ -1.54
Nup50-201ENSMUST00000165443 Gm17402F6Z0L5 76 aa5.4□□□□□ -1.55
Nup50-201ENSMUST00000165443 2210017I01RikA0A0A6YVV1 95 aa5.39□□□□□ -1.55
Nup50-201ENSMUST00000165443 TnxbO35452 4006 aa5.38□□□□□ -1.55
Nup50-201ENSMUST00000165443 Dnah17Q69Z23 4481 aa5.37□□□□□ -1.55
Nup50-201ENSMUST00000165443 Huwe1Q7TMY8 4377 aaKnown RBP5.36□□□□□ -1.55
Nup50-201ENSMUST00000165443 Kmt2aP55200 3966 aa5.32□□□□□ -1.56
Nup50-201ENSMUST00000165443 Dnah6E9Q0B6 4144 aa5.29□□□□□ -1.56
Nup50-201ENSMUST00000165443 Dnah3Q8BW94 4083 aa5.29□□□□□ -1.56
Nup50-201ENSMUST00000165443 Dnah7bL7N1Y0 4068 aa5.23□□□□□ -1.57
Nup50-201ENSMUST00000165443 PlecQ9QXS1 4691 aaKnown RBP5.21□□□□□ -1.58
Nup50-201ENSMUST00000165443 Gm11939A2A592 99 aa5.18□□□□□ -1.58
Nup50-201ENSMUST00000165443 Csmd3Q80T79 3707 aa5.15□□□□□ -1.59
Nup50-201ENSMUST00000165443 Dnah11E9Q7N9 4488 aa5.14□□□□□ -1.59
Nup50-201ENSMUST00000165443 Gm9736A0A1W2P7N1 277 aa5.13□□□□□ -1.59
Nup50-201ENSMUST00000165443 Dnah1E9Q8T7 4250 aa5.13□□□□□ -1.59
Nup50-201ENSMUST00000165443 Dnah9B1AR51 4484 aa5.13□□□□□ -1.59
Nup50-201ENSMUST00000165443 PrkdcP97313 4128 aa5.12□□□□□ -1.59
Nup50-201ENSMUST00000165443 Dync2h1Q45VK7 4306 aa5.11□□□□□ -1.59
Nup50-201ENSMUST00000165443 Vps13dB1ART2 4390 aa5.07□□□□□ -1.6
Nup50-201ENSMUST00000165443 Krtap3-2Q9D638 99 aa5.06□□□□□ -1.6
Nup50-201ENSMUST00000165443 Krtap3-3Q9D7P0 99 aa5.06□□□□□ -1.6
Nup50-201ENSMUST00000165443 Gm19668J3QMD1 248 aa5.04□□□□□ -1.6
Nup50-201ENSMUST00000165443 Krtap13-1Q8K198 168 aa5□□□□□ -1.61
Nup50-201ENSMUST00000165443 4933428G20RikQ9D3X4 101 aa4.99□□□□□ -1.61
Nup50-201ENSMUST00000165443 Dnah5Q8VHE6 4621 aa4.98□□□□□ -1.61
Nup50-201ENSMUST00000165443 Krtap19-5O08632 62 aa4.97□□□□□ -1.61
Nup50-201ENSMUST00000165443 Krtap3-1A2A591 98 aa4.97□□□□□ -1.61
Nup50-201ENSMUST00000165443 Fras1Q80T14 4010 aa4.95□□□□□ -1.62
Nup50-201ENSMUST00000165443 Stard9Q80TF6 4561 aa4.91□□□□□ -1.62
Nup50-201ENSMUST00000165443 Dnah2P0C6F1 4456 aa4.9□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 538.2 ms