RNA–Protein interactions for RNA: ENSMUST00000115274.1

Pdgfrb-202, Transcript of Platelet-derived growth factor receptor beta, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdgfrb, Length 5,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfrb-202ENSMUST00000115274 Pkd1l1Q8R526 2615 aa5.51□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Itpr2Q9Z329 2701 aa5.5□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Smg1Q8BKX6 3658 aaKnown RBP5.49□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Csmd1Q923L3 3564 aa5.49□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Tex15F8VPN2 2785 aa5.49□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Prm2P07978 107 aa5.49□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Gm21887J3QQ04 176 aa5.48□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Sec61bQ9CQS8 96 aaKnown RBP5.47□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Gm10382Q3V0T5 144 aa5.47□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 2310050C09RikG5E8Z3 280 aa5.47□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Krtap15-1Q9QZU5 150 aa5.46□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Krtap13O88375 197 aa5.45□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Gm9507D3Z5T3 223 aa5.45□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Celsr2Q9R0M0 2920 aa5.45□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 FlncQ8VHX6 2726 aaKnown RBP5.44□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Chd9Q8BYH8 2885 aa5.44□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Gm5767A0A0J9YTU8 78 aa5.41□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Krtap14O08640 167 aa5.41□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 ApcQ61315 2845 aa5.4□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Ndufaf8A2AMZ4 74 aa5.4□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Tnp2P11378 117 aa5.38□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Cox6b2Q80ZN9 88 aa5.37□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Nf1Q04690 2841 aa5.37□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Rps29P62274 56 aa5.36□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Muc5acE9QAQ8 3455 aa5.36□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 TgO08710 2766 aa5.35□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Gm19426M0QWC7 77 aa5.34□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Tenm3Q9WTS6 2715 aa5.34□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Krtap10-4Q08EG8 221 aa5.33□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Tenm4Q3UHK6 2771 aa5.32□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 FcgbpE9Q0B5 2583 aa5.31□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Helz2E9QAM5 2947 aaKnown RBP5.31□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Svep1A2AVA0 3567 aa5.3□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 D6Ertd527eA0A0N4SWI3 464 aa5.3□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 BC029722A0A0N4SW31 51 aa5.29□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 LrbaQ9ESE1 2856 aa5.28□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 OtogO55225 2910 aa5.27□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Gm9112A2AI92 75 aa5.26□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Krtap10-10A0A1W2P7T6 217 aa5.24□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Srrm2Q8BTI8 2703 aaKnown RBP5.23□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Pdzd2E9Q1M1 2796 aa5.23□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Cmya5Q70KF4 3739 aa5.19□□□□□ -1.58
Pdgfrb-202ENSMUST00000115274 Ank2Q8C8R3 3898 aa5.16□□□□□ -1.58
Pdgfrb-202ENSMUST00000115274 Gm2696A0A1W2P709 240 aa5.15□□□□□ -1.59
Pdgfrb-202ENSMUST00000115274 Gm20537G3UYK7 97 aa5.12□□□□□ -1.59
Pdgfrb-202ENSMUST00000115274 Gm40193A0A1B0GT39 78 aa5.07□□□□□ -1.6
Pdgfrb-202ENSMUST00000115274 Fbn1Q61554 2873 aaKnown RBP5.04□□□□□ -1.6
Pdgfrb-202ENSMUST00000115274 LystP97412 3788 aa5.03□□□□□ -1.6
Pdgfrb-202ENSMUST00000115274 A930033H14RikG5E8X6 103 aa5.02□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 2310057N15RikQ9D6T8 200 aa5.01□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 2310079G19RikQ9D6L6 185 aa5.01□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 Muc4Q8JZM8 3443 aa5.01□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 Gm5965D3Z724 196 aa5□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 Csmd2V9GX34 3611 aa4.98□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 B930094E09RikQ8C4T2 136 aa4.9□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 Tnp1P10856 55 aa4.89□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 Tenm1Q9WTS4 2731 aa4.88□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 BsnO88737 3942 aa4.88□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 Col7a1Q63870 2944 aa4.85□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 Tenm2Q9WTS5 2764 aa4.85□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 CubnQ9JLB4 3623 aa4.83□□□□□ -1.64
Pdgfrb-202ENSMUST00000115274 Xirp2Q4U4S6 3784 aa4.81□□□□□ -1.64
Pdgfrb-202ENSMUST00000115274 Gm9918Q8BUR5 174 aa4.81□□□□□ -1.64
Pdgfrb-202ENSMUST00000115274 Gm17416Q30KP4 66 aa4.8□□□□□ -1.64
Pdgfrb-202ENSMUST00000115274 Dnah14A0A140LIJ4 4489 aa4.77□□□□□ -1.65
Pdgfrb-202ENSMUST00000115274 VwfQ8CIZ8 2813 aa4.77□□□□□ -1.65
Pdgfrb-202ENSMUST00000115274 Huwe1Q7TMY8 4377 aaKnown RBP4.7□□□□□ -1.66
Pdgfrb-202ENSMUST00000115274 Gm9736A0A1W2P7N1 277 aa4.69□□□□□ -1.66
Pdgfrb-202ENSMUST00000115274 2210017I01RikA0A0A6YVV1 95 aa4.68□□□□□ -1.66
Pdgfrb-202ENSMUST00000115274 Gm17402F6Z0L5 76 aa4.68□□□□□ -1.66
Pdgfrb-202ENSMUST00000115274 Megf8P60882 2789 aa4.62□□□□□ -1.67
Pdgfrb-202ENSMUST00000115274 Gm11939A2A592 99 aa4.62□□□□□ -1.67
Pdgfrb-202ENSMUST00000115274 Krtap3-2Q9D638 99 aa4.59□□□□□ -1.67
Pdgfrb-202ENSMUST00000115274 Krtap3-3Q9D7P0 99 aa4.59□□□□□ -1.67
Pdgfrb-202ENSMUST00000115274 Krtap19-5O08632 62 aa4.59□□□□□ -1.68
Pdgfrb-202ENSMUST00000115274 Dnah17Q69Z23 4481 aa4.57□□□□□ -1.68
Pdgfrb-202ENSMUST00000115274 Hspg2Q05793 3707 aaKnown RBP4.54□□□□□ -1.68
Pdgfrb-202ENSMUST00000115274 Muc6Q80T03 2850 aa4.54□□□□□ -1.68
Pdgfrb-202ENSMUST00000115274 Dnah6E9Q0B6 4144 aa4.5□□□□□ -1.69
Pdgfrb-202ENSMUST00000115274 4933428G20RikQ9D3X4 101 aa4.46□□□□□ -1.69
Pdgfrb-202ENSMUST00000115274 TnxbO35452 4006 aa4.46□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Dnah10D3YYQ8 4591 aa4.46□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Kmt2aP55200 3966 aa4.45□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Dnah7bL7N1Y0 4068 aa4.45□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Dnah3Q8BW94 4083 aa4.44□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Dnah11E9Q7N9 4488 aa4.44□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Krtap3-1A2A591 98 aa4.43□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Krtap13-1Q8K198 168 aa4.42□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Gm19668J3QMD1 248 aa4.4□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 PlecQ9QXS1 4691 aaKnown RBP4.39□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Krtap7-1Q9D3I6 87 aa4.36□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Dnah1E9Q8T7 4250 aa4.36□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Vps13dB1ART2 4390 aa4.35□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Dnah9B1AR51 4484 aa4.35□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Dync2h1Q45VK7 4306 aa4.35□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Dnah5Q8VHE6 4621 aa4.35□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Csmd3Q80T79 3707 aa4.34□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 PrkdcP97313 4128 aa4.33□□□□□ -1.72
Pdgfrb-202ENSMUST00000115274 Gm10318A0A1W2P728 225 aa4.33□□□□□ -1.72
Pdgfrb-202ENSMUST00000115274 Crct1Q6PAI5 102 aa4.28□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 463.1 ms